Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1253 ATGAAGGCATCTCTAAGACTTCTCTTCATAATTGCTTTTCTTGGTCCTTTCTTCCTGGCAAGCCCAGAAGCCGACTCGTGTACCAGCACTCTAAACCTCAAAGTTCCTGTCCCCTTTGATACAACAGATCTTCACTGTCTTTCTGTATGGGATGCTCAAGGATTCATCCTCAGATATGTTCAGACCTCCGCAAACATTTGGAGCTTCATTCTCTCAACCCCAGACACAAATTCTTACATAGCTATGGGGTTCTCAGTTAGCGGTGGCATGGTGGGTTCAAGTGCCATGGTAGGGTGGGTGGCATCTAGAGGAGCCAGTGGAGGGATAAAGCAGTATTATCTTGGTGGGATTACACCAAATCAGGTGGTTCCTGATAAAGGTAACCTGCAGGTTATAGCCAATTCAACCTTCATCACTTTACAGTCCTCTCGACTGTATATGGTGTTTCAGTTAGAAACTACCGAACCTTTGTCCTGGCTGATATTTGCGACTGGATCCACTGGTTTATTCCCCGCACCCCCAAGTTATACACTCACAAAACACCTAGACAAGGTTTCCACAAGAATAGACTACTCAAAAGCCAACATTGGAAGTTCACAAGGGGATGGAAGTTCTTCTCAAGGAGGTGGAACTAGTTCACAAGCAGATTCCTGTGGCTCCAACTTAAACCTCAGTGTTCCTCTCCTCTTCGACACAGCCAATCTCATTTGTCTTCCTGTTTGGAATGCACAAGGATACATCCTTAGATATTCTCAAACTTCTCCAAACATATGGAGCTTCATTCTCTCAGCACCAAATCCAAATTCTTACATAGCAATGGGGTTCTCTCCCAATGGAGGCATGGTGGGTTCAAGTGCCATAGTGGGGTGGATCTCATCCAGTGGAGCTGGTGGAGGCATGAAGCAGTATTATCTAGCAGGAGCCACACCAAACCAAGTAGTGCCAGATAGAGGAAACTTACAAGTTCTCACAAAGTCAACGTTGATTACATCACAGTCCTCACGTTTGTACATGGCCTTTCAGCTACAAACCAACCACCCTCTGTCTCGCTTGATTTATGCCTTTGGTCCTAACGGTATCTTCCCCTCCGCACCGAGTTTTTCATTAACACAGCATCAGGACAAAGTTTCCATTACGTTGAATTACGCTACAGGTTCAGGTGCATTAGAAAACCCAAGCATGAACCTGAAAAAAATCCATGGAGTGTTGAATATTTTGGGATGGGGCATCTTAATCATAATGGGAGCAATAGTTGCTCGCTACTTCAAGGAATGGGATCCATTTTGGTTTTATTTTCATGCTTCAGTTCAATCCTTGGGTTTTGTTCTCGGAGTAATTGGTGTAATTACTGGGTTTGTCTTGAATAATCAACTTCATATTGATGTTAGTCTTCACAAGGCTCTAGGAATCATCATTCTCGTTCTTGGTTGCCTCCAGATAATGGCTTTACTTGGTCGACCAAAGAAGGAATCAAAAGAGAGAAAGTATTGGAATTTATACCATCATAGCATGGGGAGAATTTTGATTATATTAGCCATAGCTAACATTTTCTACGGAATCCAATTAGGAAAGGAAGGAAGGGGTTGGAATATAGGTTATGGAATTGTTCTTGCCATATTACTCTCCATCGCTGTTATTTTTGAGACTAGACTGTGCAGTACAGACTAA 1668 0.4311 MKASLRLLFIIAFLGPFFLASPEADSCTSTLNLKVPVPFDTTDLHCLSVWDAQGFILRYVQTSANIWSFILSTPDTNSYIAMGFSVSGGMVGSSAMVGWVASRGASGGIKQYYLGGITPNQVVPDKGNLQVIANSTFITLQSSRLYMVFQLETTEPLSWLIFATGSTGLFPAPPSYTLTKHLDKVSTRIDYSKANIGSSQGDGSSSQGGGTSSQADSCGSNLNLSVPLLFDTANLICLPVWNAQGYILRYSQTSPNIWSFILSAPNPNSYIAMGFSPNGGMVGSSAIVGWISSSGAGGGMKQYYLAGATPNQVVPDRGNLQVLTKSTLITSQSSRLYMAFQLQTNHPLSRLIYAFGPNGIFPSAPSFSLTQHQDKVSITLNYATGSGALENPSMNLKKIHGVLNILGWGILIIMGAIVARYFKEWDPFWFYFHASVQSLGFVLGVIGVITGFVLNNQLHIDVSLHKALGIIILVLGCLQIMALLGRPKKESKERKYWNLYHHSMGRILIILAIANIFYGIQLGKEGRGWNIGYGIVLAILLSIAVIFETRLCSTD* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1253 555 SMART 561_7 399 520 IPR006593 -
Apr10g1253 555 SMART DOMON_3 270 356 IPR005018 -
Apr10g1253 555 SMART DOMON_3 79 165 IPR005018 -
Apr10g1253 555 CDD Cyt_b561_FRRS1_like 377 548 - -
Apr10g1253 555 CDD DOMON_DOH 244 377 IPR045266 -
Apr10g1253 555 ProSiteProfiles Cytochrome b561 domain profile. 363 555 IPR006593 -
Apr10g1253 555 PANTHER BNAC01G39800D PROTEIN 19 195 - -
Apr10g1253 555 PANTHER BNAC01G39800D PROTEIN 213 553 - -
Apr10g1253 555 CDD DOMON_DOH 45 173 IPR045266 -
Apr10g1253 555 ProSiteProfiles DOMON domain profile. 53 165 IPR005018 -
Apr10g1253 555 Pfam Eukaryotic cytochrome b561 400 520 IPR006593 -
Apr10g1253 555 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 213 553 - -
Apr10g1253 555 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 19 195 - -
Apr10g1253 555 ProSiteProfiles DOMON domain profile. 244 356 IPR005018 -
Apr10g1253 555 Gene3D - 376 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1253 Apr-Chr10 24929648 24937036 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1253 - - gmx:100804791 935.25