Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1248 ATGGCAGCCTTTGATCACTTCAGGAACATGTACGATGTTGCACTCAAACCTCGCTTGCTTCATTCCCTTATCAGAGACCACCTTCCCAATGAAAAGCACCCCTTTTCAAACCCTTCGGAACTGTCCAAGGTTGTCTCTTTGGTCAAAACGCACTCTCTTCTCTCTGAGTCTTTTACAGAATCCATGGACCCCAAGCTTATTCAAGCATGGAAATCTGAAGTTACTTCCTGGGTCAACCACATTCTGTCCCTCCTTTCTACTACTATGCCAGATAAATGCTGGGCGGGTATCTCTCTGTTGGGTGTTACTTGTGAAGAGTGTAGCTCTGATCGTTTCCTAGAATCTTACTCTCTGTGGTTCCAGAAATTGCTGTCTTTTCTACAGTCACCATCAGATTCTCATTTAGTGAGGGTAGCTTCTTGCGCTTCCATATCTGATTTATTTGCAAGGTTAAGTGGATTTCCTAAGATCAAGAGAGATTCGTCTTCCTGTGCTGTGAAAGTTGTTCAGCCTGTTTTGAAGATGTTACAAGATGACAACTCAGAGGCAATATGGGAATCCGCAGTTCATTTGTTATGCACCATAATTACTTCATTTCCATTTTCTATTCGTAATCATTATGATAGTGTTGAATCTGTTATTGCCATAAAGCTTTTCTCTGGAGGGTGCAGTCTTAATATGTTGAAGAAACTTGCACATTGCCTTGCACTGCTACCAAAATCAAAAGGAGATGAAGAAAGCTGGTCTGTGATGATGCAGAAAATTTTGGTCTTAATAAACGATCAATTAAATTTGGCCTTTCAAGGTCTAGAAGAAGAAACTATCCGTAACGAGGTTAATAGGTTGTTGGTTCTGTCTGGAAAACACCCTCCACCTACATTAAGAGGCTATATGTTGTCAGAAGAAGCTAGTAACAAAGCATCAAAGAGGTCTGAGCAATCATTAATGTCTAATGTCTCCACACTTATGTTTGGCTGTTGCTTGATGCTTACAAACTCATATCCTGTTAAGGTAAATGTGCCTGTTCGCCTGCTATTGGCCCTTGTTGAGAGAATTCTGATGGTTAATGGATCTTTGCCACAAATATCACTGCCATTCATGACTGCTAAGCAGCAAGAGAACATTTGTTCAGAGCTTCCGGTTTTGCACTTGAGCAGCCTGGAATTGCTTACAGCAATCATAAAGGCCATGGGCAGTCAACTATTACCACATGCTGCATATATCGTACGTATCATTACAAAGTACTTCAAGACATGTCAGCTGCCAGAATTAAGGATTAAGGTCTATTCAGTCACAAGGACTTTGCTCATATCCATGGGTGTCGGAATGGCTTTATGCCTTGCACAGGAAGTTATCAACAACGTGTTTGCTGATTTAAGTACTGTTGAGAATAAGAATGGTGGCACGTTGAATGGTTCAAATTCAAATGCCTCTGCTGGAGCACTCCTACCCCCAAGTCATAGAAAAAGGAAGCACAGCAGTACAACTGGTTCTCTCCAAGATCTTGAAAAAAGTGGTGATTTGAGAGTGGAAGTTCCAAAGAATCATTCATTGACTCCAATTTCTCTGAGGATAGCTGCACTTGAGGCGTTAGAAGCTCTTGTTACTGTGGCTGGTGCTTTAAAATCTGAGCAATGGAGATCAAAAGTTGATAGCCTTTTGATAGTCATAGCAACGGAGTCTTTCAAGGAAGGATCAGTAAATGAAGAAACAAGTGCATTTCAGCAAAAAGAACCTACAGAAAATGGCACACATTTGCAGCTTGCTGCATTGCGTGCTCTATTGGCATCTTTTCTTTCATTTGCTCGGGTACGGCCACCATATTTAGTCCAGGGTCTCGAACTTTTCCGTAGAGGGAAGCAACAAACAGGAACAAAACTTGCTGACTTCTGTGCCCATGCTCTGTTAACCTTGGAAGTGCTTATACATCCTAGGGCACTTCCATTAGCTGATTTCGCCTATGCAAATAACAATTCTTTTGAGGAAGCTCAGTGTAACTTCCGAGATGAATATGTCGGCCGGAACAACAGTACCGCATCATATGGTTTACCAAAAGCAGTTCCTCCTGACTATGATGACGATTTGTGCGCTAGATGGTTTGAAAATGGCAATGAAGCCGATGCGTCATTGGCTAAAACCACAAAATACACCCAAGAGCCTTCTGAAGCTTGTAGAGCTAATGACCCCAAAGTGCTTTCCATGCCTCTATCTCCTATCACCAATATACAAGAGAGGACTCAGAAGGTATCTGTGACTACCACTTGTGCAGATGTTGAAATGAGAACTGTTGTGGATGAAGTCATGATCAAGACAGATCAATCTGGAGAATCGGTGGCACAATTTCAGGAACCTGTCAGTTGCACCACGAACATCCCCGTGGCTGAAGCTCACGGCGATGTAGCAACTGATGTAGTGTCTGAGGGGATAGTTTCTGAAAGCACTATGCCTCATAATGAAGCCAGTGTTATGGAATCAGGACAAGGAAGCTTGGTTAATATCGACTTTGAATTAGCTTCCCAGAGCAACAGTTCAATGCAGAGAACATCAGATTCTAAAATGAGTCAAGAATTTGATTTTAAATTGGATTATGGCAATTCACTGGCTGATGAAGAAGCTTTTCCTGATATTGTGGATGCAGACCCAGATTCTGATTCTGATTAA 2661 0.4194 MAAFDHFRNMYDVALKPRLLHSLIRDHLPNEKHPFSNPSELSKVVSLVKTHSLLSESFTESMDPKLIQAWKSEVTSWVNHILSLLSTTMPDKCWAGISLLGVTCEECSSDRFLESYSLWFQKLLSFLQSPSDSHLVRVASCASISDLFARLSGFPKIKRDSSSCAVKVVQPVLKMLQDDNSEAIWESAVHLLCTIITSFPFSIRNHYDSVESVIAIKLFSGGCSLNMLKKLAHCLALLPKSKGDEESWSVMMQKILVLINDQLNLAFQGLEEETIRNEVNRLLVLSGKHPPPTLRGYMLSEEASNKASKRSEQSLMSNVSTLMFGCCLMLTNSYPVKVNVPVRLLLALVERILMVNGSLPQISLPFMTAKQQENICSELPVLHLSSLELLTAIIKAMGSQLLPHAAYIVRIITKYFKTCQLPELRIKVYSVTRTLLISMGVGMALCLAQEVINNVFADLSTVENKNGGTLNGSNSNASAGALLPPSHRKRKHSSTTGSLQDLEKSGDLRVEVPKNHSLTPISLRIAALEALEALVTVAGALKSEQWRSKVDSLLIVIATESFKEGSVNEETSAFQQKEPTENGTHLQLAALRALLASFLSFARVRPPYLVQGLELFRRGKQQTGTKLADFCAHALLTLEVLIHPRALPLADFAYANNNSFEEAQCNFRDEYVGRNNSTASYGLPKAVPPDYDDDLCARWFENGNEADASLAKTTKYTQEPSEACRANDPKVLSMPLSPITNIQERTQKVSVTTTCADVEMRTVVDEVMIKTDQSGESVAQFQEPVSCTTNIPVAEAHGDVATDVVSEGIVSESTMPHNEASVMESGQGSLVNIDFELASQSNSSMQRTSDSKMSQEFDFKLDYGNSLADEEAFPDIVDADPDSDSD* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1248 886 Pfam rRNA processing/ribosome biogenesis 22 222 IPR012583 -
Apr10g1248 886 MobiDBLite consensus disorder prediction 468 506 - -
Apr10g1248 886 PANTHER PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1 9 884 - -
Apr10g1248 886 PANTHER PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1 9 884 - -
Apr10g1248 886 SUPERFAMILY ARM repeat 65 595 IPR016024 -
Apr10g1248 886 Gene3D - 52 436 IPR011989 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1248 - - aprc:113850109 1678.3