Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1240 ATGGAGGACACGGCCAAGTTGCGATTGGTGAGGTGCCCCAAGTGTCAAAATGTGCTTCCCGAGCTTGCCAATTACTCTGTTTATCAATGTGGTGGTTGCAATGCTGTTCTTAGAGCAAAGCTTAAAGGTTCTGAAAGTGGTAGCATGTGGGAGGCATCAGATGAGGGACAGGGTGGAGGGGATGATGCTAAATCAGGAAATTCCTTGGGGAAAGGGGTAGTTGATTTGAGTGATAATTCAGATGTTGATGTTAAGTCCAATGGTGGTTTCTCCGGGGAGGATCAAAGAAGGGATTCAGAGAGATCAAGTAGAGGACACGAGCAGTATCTGGATCATTCCAAGGATGGGGATGAGAAAGGGGTTTTGGAGAATGGTTTTGATGTCAATAAAGACAAAGATGAAGGAGGCAAATCAAAAGGAAGAGTGAAGCAGGAGCAGAAGTATCGAATGGGAGGGTCTGAATTCTCTGGGAGAATGTCTAACTGGCCAAATGAGGAGAGAGGTGGGATGGAGGGGTTTTGGAGAAAGCCACAAGCTGAGATAGAAGGTGTGAGATTTACCACTTTGAATTACCCTGATGAGGGAACTTCCAATAGCTATTCCAGTTTTTCTTATAATCATGGCGAACAATGGAGGAATTATAAAGACATGGATGGTGTCAACAGGGTTCAGCACCTCGAGCAAGATCGAGCTGAGCTTCTGAGGAAGCTGGATGAGTTATCCAACCAGCTGAACAAGTCTTCTGAAGTGGTTCATAACCAGAAGGAAAAGGTTGTTCCTCATGGAAAGATGGTTCCTCCAGATCCTTATAGTGGCCCTACTGATACTTTTTTTCCGGATGGATCATCAGGGATGAACAGGACTTCAAGACAATTCTTTGGCCCTAATAAACACATGGCAGGTCCCTCTTATTTCAATTATCATCATGATCCATATGCTTATACTAGTGGTCATGAAATGGCTATGCCCAACTTCCACCCTTCAATGCATAATCCAAATTATATGCCTGGATATGCTGATCCTTTTGCATCACAAATGATGAGGGGTTCACATCCTTTACCTCATCAATTCCTGAACCAACCAATGCATCCCTACTTTCCTGAACGCTATGCTGATACTGCTCCAAATTCATATGATCCATATGCATATAGTGCTATGCTTCATGCACCTTCTTGTTCTTGTCTTCGTTGCTATGAAAACAGAAGAAGAGGTTCAGTGCCAGTGCCACCTGCTGCCTTCGTTAATGGCAGATTTCCGCATGCCCCAAATGATCCTATGTTATACCATCATGAGATGCCAGGGTCAGTTGGTCCGCATGCTCATAATTCTAGAACTGCCATTCCTGCTGTGAGTTTACATGAAAAACAATTACATACAAGATGGCCTGAAGACTACAATTCCGAGATAAGTGGTTTTGTCCGAAGCCGTCCTCGAAAAGTGATGCCTGCTGGTGGTATTCGCCATTGCCATCCTATAGCTGGCGGTTCTCCATTCATCACTTGTCAAAATTGCTTTGAGTTACTGCAACTGCCTAAAAAAGCACTAGTCATGGTGAGAAAACGTCAGCAGAAAATGCGATGTGGGGCTTGTTCTTCAGAAATAAATTTTGCTGTCATCAACAAGAAGCTAGTTTTTTCTCTTCAATCAGAAATGAGGGAAACTACCACATCCACAAGGATTGATGATACCATCAACGATGTTGGGAATAACCGTGTGTTACATTCCCATGGTCACGTGAACACAAGTGCTGTGAACTTCTCATCTGATGATTATTCTGGTTATGATTTTCAGTCGGTTGATAGAGAATCTCCTGTGTTGGCTGTGGACCCAAGCTTGAACTCAAGCAAATCCCACGAGATGCAAAGTTTCCGTTCTTCATCTTCCAGCACCTCTGAAGATGAAAATAGTCCAGAAGTTATGACTGCACCAAGTGAAACTACCAAGTCCATAGATCAGCCAACTAACGCCTCTCTATATCCTCCACCTACTGGCTCACCTCTTCAAGAGTATTTTGATTATTCTAGTAATAACCACGTGGTAAATCGGCATGGGAAAGGCAACCAAAGTAGTCGCTCAGATCAGGAGAAGGCAAAAATAGAAAAGAATACTTCGAGGCAAAACTCTTTGAAGGAGGTAGTGCTTGCAACAGAGATGGATGTCCATGATTATTCTAACACTGTGGTCTCCCAGGATTCTGGTGATGCTAGTCGAGAACATGATCATCCTAGATCTAATAACAAAGGTGGTGAATCATTTTTGGCAAATATTATCAAGAAAGGCTTCCGGGATTTCTCCCTAACTAATCAAATCGATGATCACAGTAAAAGTGATGTTACTGTAAATGGACAGCCCATACCAGATCGTGTGATTAAGAAGGCTGAAAAGCTAGCTGGACCAATCCAGCCAGGAAATTACTGGTATGATTTTCGGGCTGGATTTTGGGGTGTCATGGGTGGTCCATGTCTTGGAATAATTCTGCCATTCATAGAAGAGTTCAGCTATCCGATGCCAGATAAATGTGCTGGCGGAAATACTGCTGTTTTTGTAAACGGCAGGGAACTTCACCAAAAGGATTTAGATCTACTTTCACGTAGAGGGCTTCCTCATGATAGCAATAGATCTTATATCATTGAAATTTCTGGGAGAGTCCTGGATGAAGACACAGGAGAAGAGTTAGACAGCCTTGGCAAACTTGCACCAACAGTGGAGAAAGCAAAGCATGGATTTGGCATGAAAGCACCCAAAGCAGCTGCATAA 2757 0.4338 MEDTAKLRLVRCPKCQNVLPELANYSVYQCGGCNAVLRAKLKGSESGSMWEASDEGQGGGDDAKSGNSLGKGVVDLSDNSDVDVKSNGGFSGEDQRRDSERSSRGHEQYLDHSKDGDEKGVLENGFDVNKDKDEGGKSKGRVKQEQKYRMGGSEFSGRMSNWPNEERGGMEGFWRKPQAEIEGVRFTTLNYPDEGTSNSYSSFSYNHGEQWRNYKDMDGVNRVQHLEQDRAELLRKLDELSNQLNKSSEVVHNQKEKVVPHGKMVPPDPYSGPTDTFFPDGSSGMNRTSRQFFGPNKHMAGPSYFNYHHDPYAYTSGHEMAMPNFHPSMHNPNYMPGYADPFASQMMRGSHPLPHQFLNQPMHPYFPERYADTAPNSYDPYAYSAMLHAPSCSCLRCYENRRRGSVPVPPAAFVNGRFPHAPNDPMLYHHEMPGSVGPHAHNSRTAIPAVSLHEKQLHTRWPEDYNSEISGFVRSRPRKVMPAGGIRHCHPIAGGSPFITCQNCFELLQLPKKALVMVRKRQQKMRCGACSSEINFAVINKKLVFSLQSEMRETTTSTRIDDTINDVGNNRVLHSHGHVNTSAVNFSSDDYSGYDFQSVDRESPVLAVDPSLNSSKSHEMQSFRSSSSSTSEDENSPEVMTAPSETTKSIDQPTNASLYPPPTGSPLQEYFDYSSNNHVVNRHGKGNQSSRSDQEKAKIEKNTSRQNSLKEVVLATEMDVHDYSNTVVSQDSGDASREHDHPRSNNKGGESFLANIIKKGFRDFSLTNQIDDHSKSDVTVNGQPIPDRVIKKAEKLAGPIQPGNYWYDFRAGFWGVMGGPCLGIILPFIEEFSYPMPDKCAGGNTAVFVNGRELHQKDLDLLSRRGLPHDSNRSYIIEISGRVLDEDTGEELDSLGKLAPTVEKAKHGFGMKAPKAAA* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1240 918 PANTHER EXTRA-LARGE G-LIKE PROTEIN 1 916 - -
Apr10g1240 918 MobiDBLite consensus disorder prediction 90 148 - -
Apr10g1240 918 Pfam Probable zinc-ribbon domain 493 538 IPR021480 -
Apr10g1240 918 MobiDBLite consensus disorder prediction 608 709 - -
Apr10g1240 918 MobiDBLite consensus disorder prediction 688 705 - -
Apr10g1240 918 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 1 916 IPR040244 GO:1900150
Apr10g1240 918 MobiDBLite consensus disorder prediction 608 687 - -
Apr10g1240 918 Coils Coil 223 257 - -
Apr10g1240 918 MobiDBLite consensus disorder prediction 48 164 - -
Apr10g1240 918 MobiDBLite consensus disorder prediction 727 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1240 Apr-Chr10 24794687 24799763 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1240 - - aprc:113849738 1875.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1240 10 24794687 24799763 Apr10g1240 10 24794687 24799763 ECH
Apr4g0908 4 7299828 7305324 Apr10g1240 10 24794687 24799763 PCT