Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1239 ATGGTGAAGAGAATAAGGTCTGATATGGGACCATTTTCCATGCAAAAGCATAACCATTTCTGTGTTAAGTTTGCAGTCTCATTTTTCTTGGTGGGTCTCGTTATTCGCCTTCTCTTGTGGGATTCATTCAGCTTGTTTTCATCAATCGTGGTGGAAACACCTCCTCCTCTGGCAGAGGCAAAAGCAGATTCCCCTGTTTTATCTTCCCCACTTCAGGTTTCTGATTCTGATGACTTTCCAGGGAATAACCAGACCCAAATTTCTAAGGATGAAAAATGTGATCTTTTTGTGGGAGATTGGGTGCCAGACCTAACTGGTCCAGAATACACTAATGAGAGCTGCCATGTGATTGAGCCTCATCAAAATTGTATAAAAAATGGACGCCCTGATTCAGGGTACCTTTACTGGAGATGGAGCCCACGAGACTGTAAATTGCCCAAGTTCAATCCCAAGAAGTTTCTTAAACTTATGAGAAATAAATCAATGTCCTTTATTGGTGATTCCATCTCCCGCAACCAAGTGCAATCCCTACTTTGCATTCTCTCAAAGGTGGAACCAGCTGTTGAGGTCTACCATGACAAGGAATACAGATCAAAGATATGGAAATTCCGTTCTCACAACTTCACACTTTCAGTAATCTGGACCCCTTTCCTTGTCAAAGCAGCTATATTTGAGGACATGAATGGAGTTACCTCTTCAGAGATACAGCTTTATCTTGACAAACTTGACAACAAGTGGACTAACCAATACAAAAATTTTGATTATGTCATAATTGGTGGTGGAAAATGGTTTCTCAAGACTGCAATATACCATGAAAACAGCACAGTCACAGGTTGCCACTACTGCCCTGGAAGGAACTTAACAGAGCTAGGATTTGATTATGCATACCGCAAAGTACTACAAGAAGTGTTCAACTTCTTCGCAAAGTCTAACCACAAAGCCACTGTTCTCTTCAGAACCACCACACCAGACCACTTTGAGAATGGTGAGTGGTTTAGTGGAGGGTATTGTAATAGAACTGTACCTTTCAAAGAGGGTCAGATACATATGATAGATGTAGATTCCATCATGCGTGGTATTGAACTTGAAGAGTTTGAGAAGGCTATTTCCTTAGGATCTGACAAAAGGGTGAAGTTGAAACTTTTGGACACAACTCTTCTTTCACTGTTGAGACCAGATGGGCATCCAGGACCTTACCGGCAGTTCCATCCATTTGCAAAGGATAAGAATGCTAAGGTTCAGAATGATTGTCTACATTGGTGTTTGCCAGGACCAATTGACTCGTGGAATGACATAATAATGGAAATGCTAGTCAATGCATGA 1323 0.4135 MVKRIRSDMGPFSMQKHNHFCVKFAVSFFLVGLVIRLLLWDSFSLFSSIVVETPPPLAEAKADSPVLSSPLQVSDSDDFPGNNQTQISKDEKCDLFVGDWVPDLTGPEYTNESCHVIEPHQNCIKNGRPDSGYLYWRWSPRDCKLPKFNPKKFLKLMRNKSMSFIGDSISRNQVQSLLCILSKVEPAVEVYHDKEYRSKIWKFRSHNFTLSVIWTPFLVKAAIFEDMNGVTSSEIQLYLDKLDNKWTNQYKNFDYVIIGGGKWFLKTAIYHENSTVTGCHYCPGRNLTELGFDYAYRKVLQEVFNFFAKSNHKATVLFRTTTPDHFENGEWFSGGYCNRTVPFKEGQIHMIDVDSIMRGIELEEFEKAISLGSDKRVKLKLLDTTLLSLLRPDGHPGPYRQFHPFAKDKNAKVQNDCLHWCLPGPIDSWNDIIMEMLVNA* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1239 440 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 26 48 438 - -
Apr10g1239 440 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 48 438 IPR029962 GO:0016413
Apr10g1239 440 Pfam PMR5 N terminal Domain 91 144 IPR025846 -
Apr10g1239 440 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 145 436 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1239 Apr-Chr10 24787447 24791673 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1239 - - gmx:100305942 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1239 10 24787447 24791673 Apr10g1239 10 24787447 24791673 ECH
Apr4g0909 4 7309351 7311738 Apr10g1239 10 24787447 24791673 PCT