Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1233 ATGGCAAGAGTTAAGCACACCCCAGCATCGCGTAAACCTGCAAGAAAGAAAGCGCCATCAGCATCTGCATCAACACCACAATCCCAATCACCTCGTCGTAGCGAGCGGAGAAGAACTCAAGAGCAACCGCAGTCAGCTGAGACTCAGGGAGGGAAGAAAAGGCGCAGTAAGCCAGGAGCAGCGGCACTTCGCGAGATTCGAAAATATCAGAAGACTTTCAAGCTTCTTATCCCAGCTGCACCCTTTATTAGATGTGTCAAACAGATTACAAACCAATTATCTACGCAGGTCTCTCGCTGGACACCAGAAGCTGTGGTAGCACTCCAAGAGGCAGCTGAGGATTATCTGATTCATATGTTTGAAGATGGAATGCTCTGTGCAATTCATGCAAAGCGTGTTACTCTTATGAAAAAGGATATTGAGTTGGCCCGTAGGCTTGCAGGAATAGGAAGGCCTTGGTGA 462 0.4805 MARVKHTPASRKPARKKAPSASASTPQSQSPRRSERRRTQEQPQSAETQGGKKRRSKPGAAALREIRKYQKTFKLLIPAAPFIRCVKQITNQLSTQVSRWTPEAVVALQEAAEDYLIHMFEDGMLCAIHAKRVTLMKKDIELARRLAGIGRPW* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1233 153 PRINTS Histone H3 signature 5 19 IPR000164 GO:0000786|GO:0003677|GO:0030527
Apr10g1233 153 PRINTS Histone H3 signature 113 129 IPR000164 GO:0000786|GO:0003677|GO:0030527
Apr10g1233 153 PRINTS Histone H3 signature 129 150 IPR000164 GO:0000786|GO:0003677|GO:0030527
Apr10g1233 153 MobiDBLite consensus disorder prediction 31 60 - -
Apr10g1233 153 SMART h35 48 151 IPR000164 GO:0000786|GO:0003677|GO:0030527
Apr10g1233 153 Gene3D Histone, subunit A 2 149 IPR009072 GO:0046982
Apr10g1233 153 PANTHER HISTONE H3 8 153 IPR000164 GO:0000786|GO:0003677|GO:0030527
Apr10g1233 153 MobiDBLite consensus disorder prediction 1 60 - -
Apr10g1233 153 Pfam Core histone H2A/H2B/H3/H4 27 146 IPR007125 GO:0003677
Apr10g1233 153 PANTHER HISTONE H3-LIKE CENTROMERIC PROTEIN HTR12 8 153 - -
Apr10g1233 153 SUPERFAMILY Histone-fold 24 149 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1233 Apr-Chr10 24717225 24720989 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1233 K11253 - gmx:100811872 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1233 10 24717225 24720989 Apr10g1233 10 24717225 24720989 ECH