Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1228 ATGGGAGAACATGAGGGGTGGGCACAGCCACCAAGTGGGCTATTGCCAAATGGGTTGTTGCCCAATGAAGGTGCCTCTGTGATACAGGCGCTTGATTCGGAGCGGTGGTTGAAGGCTGAACAGAGGACTGCAGAGCTGATTGCCTGTATTCAGCCTAATCCACCCTCTGAGGAGCGCCGCAATGCAGTTGCAGACTATGTCCAGCGGCTGATCATGAAGTGCTTCCCTTGTCAGGTGTTTACCTTTGGGTCGGTACCCCTAAAAACTTATTTGCCAGATGGAGATATTGACTTAACAGCGTTCAGTGAGAATCAAAATCTGAAGGATACATGGGCACATCAGGTTCGTGACATGCTGGAGAATGAGGAGAAGAATGAGAATGCAGAGTTTCATGTCAAAGAGGTTCAGTACATCCAGGCTGAAGTGAAAATTATAAAGTGTCTTGTTGAGAATATCGTAGTAGACATTTCATTTAACCAGCTTGGAGGGTTGTGTACCCTTTGTTTCCTTGAGGAGGTTGATAATCTGATTAACCAAAATCATTTATTCAAGCGTAGCATTATACTGATAAAAGCTTGGTGTTACTATGAGAGCCGTATACTTGGTGCCCACCACGGACTTATCTCAACTTATGCTTTAGAAACCTTGGTTCTTTACATATTTCATGTTTTCAACAATTCCTTTGCTGGACCACTTGAGGTATTGTATCGATTTTTGGAGTTTTTTAGTAAGTTTGACTGGGACCATTTCTGTGTAAGTTTATGGGGTCCAGTATCCATTAGTTCACTCCCAGATGTATCAGCTGAACCTCCTCGAAAAGATGGTGGAGATTTACTGCTCAGCAAGTTATTTCTCGATGCCTGTAGCTCAGTTTATGCTGTTTTCCCTGGTGGCCAAGAAAATCAGGGGCAACCCTTTGTTTCCAAGCATTTCAATGTTATTGATCCTTTGCGTGTCAACAATAACCTTGGTCGTAGTGTCAGTAAAGGTAATTTCTTTAGGATACGCAGTGCCTTTGCATATGGAGCAAAACGGCTGGCTAGATTACTTGATTGTCCAGAGGAGGAATTGTCTTTTGAGGTCAATCAATTCTTTTGGAACACTTGGGACAGACATGGAAGTGGGCAACGACCTGATGCTCCAAGCAATGACCTATGGCGTTTGAGGTTATCTAGTCATGACCAATTACAGAGATCTGAGAATCTCCAGAACAATAACCACAAAATTGATAATGCCTCCAACTGTGAATTTAATATGGAAGGGGAACATGTTCCACGAAGTGGTTTATCTCAGTATAGCAATTTATCATCTGAAAACTCATATAAAAGTGTTGTTTCCACAGTGTCACATTCTCAGAGTCAAAAGAGTTATGGAAACCAAAATAATTCAAGAAAATTTGATCATGTACGAAGGGAAACTAATTCTAATCAAGGTGCTTATGTTGATAAAGGTCAGAGAAATGTTAAAGCTGATAACCTAGCGAGTGATATTCAGGGGAGATTTCTATTTGCCAGGACACGATCTAGCCCAGAGCTGACTGACTCATATGGTGAAGTATCCTCCCAAGGAAGGCGTACAAACGCAACAGAAAGTAGCAAAGCCCATAATTCCATTGCAAAGTTGGAGAATAGTCATAGGAAGGACCTTGAACCTGATGTAGCTGCAAGAGTTGATGAGTCATCTGCTAGGCACATCTCATCTCGCCAAGTTCTTGATAGTGCTGCTGATTTAAACAGTAATCACGATGATTCAGGCTCAGGTGTGATGGGAGAAGAATTTGCTTCTGTTCCTGGAGCAGGTGGAATGCAGATGATGCATCAGGAGGAGCAGGACCTTTTGAATATGATGGCTTCTCCCGTAGCTCAGGGTTTCAGTGGTCAGGCACATGTTCCAGTTAATATAGCTCCAGGTCACCTACCATTTCCCTTTCCACCATCCATTGTTGCATCAATGGGATATGCTCAGAGAAATATGGGTAGCATTCCCTTTATTGAGGCTCCTTGGGCTACAAATATGCAATTTCCTCAAGGTTTTGTCCCTTCACCGTTGACTCCATATTTCCCTGGCATAGGATTGACCTCAAACCCTCAAGATTTACTTGAAACCAACAATGAGAATTTCAGCTCTGTTGAAATGAACATAGCCGAAGCTGATAATGATTTCTGGCATGACCATGAAAGGGGTTCTGCCAGTGAGGTTGAAGTTGATAATGGAAATTTTGAAATGCTTCCAGATGATAAACAACAGTCTACTTCAGGTAATTTTAACTCTGCCCCATTGTCTCGGGTAGGCAGCTCCAGAAGTTCTTCAAGAGGTCAGCCAAAGTTTACTAAAGAAAACCGAGGGTCAACAAGAGAAGAGCATATTGATAATTTTCATTATCAAGATGATCAGAGAAATGACATTTATTTTGATGATAGAACAGCAAATTCTGAGTTGCCCAGTGCACCTCCTTCGGGCTCCTTCAGGAGTAGGACCGCTTCTGAAAGCTCTTGGGAAGGATCATTAGCCAAATCCTCGAAATCAACAAAGGAAAAAAGGGGGAGGAAAAATACTCCTTCAATGCCATCTCCTGTTTATGGAAAGGGTAAGAATACCTCAGAAATTTCATCAAGTCAAGCAGATGATGAAAACAGAGAGTGGACTGCTTTGTCGACTATGCCATCTGATATGGCTGAAAGAAGCACTGGACCCACACCTGGTACTTCCATGCATATTCCTAGGAATCAAATATCTGGTTATGAAACTGCTCAGACAAGTGGATCAGACTCTCCATTACCCATAGCTCCTGTGCTTTTAGGTCCTGGTTCTCGCCAAAGAACAACTGATAATTCTGGGGTTGTTCCATTTGCGTTCTATCCAACCGGGCCACCAGTTCCGTTTGTTACAATGCTTCCTTTATATAATTTTCCAACTGAGTCTTCTGACACATCGACAAGCAACTTCAATGTGGAAGAAGGGGCAGATAACAGTGATTCAGGTCAGAATTTTAATTCATCTGAGGGATATGAACAGCCTGTGGTGTCAAGCCCTTCTAATTCTATGACAAGGGCAAGTATTGAGTCATCAGAGCACAAGCCTGACATTCTTAATAGTGACTTTGTTAGTCACTGGCAAAATTTGCAATATGGCCGATTTTGTCAAAACTCACGTCATCCGCCTTCAATGGTCTATCCTTCACCTGTTATGGTGCCTCCTGTTTATTTGCAGGGTCGATATCCTTGGGATGGTCCTGGAAGACCACTTTCTGCTAAGATGAATATTTTCAGTCAGCTTATGAGTTATGGGCCACGTCTGGTTCCTGTTGCTCCTCTCCAATCGGTTTCTAATAGACCTGCAAATATTTACCAACGCTATGTAGATGATATGCCACGGTATCGAAGTGGGACTGGAACCTACCTTCCAAATCCGGTTACTGTTCGGGATAGACATTCCACAAATACGAGAAGAGGAAATTACCACTATGATAGAAATGACCATCATGGTGATAGAGAAGGAAACTGGAATACAAACTCAAAGTTGCGAGGAACTGGGCGTGGCCATAACCGCAACCAAACAGAGAAGCCCAGCTCAAAACCAGAGCGGGCAACTAGTGAGAGCCGAGTTGAGAGACATTGGGGTTCACATAGACATGAATCTTTCCTTTCTCACCAGAATGGTCCAGTCCGCTCAAATTCCACACAGAGCAATCCTGCCAATGTAGCTTATGGAATGTACCCTATTCCAGCCATGAACCCCAGTGCGGTCTCATCGAATGGACCTTCAATTCCATCTGTAGTAATGTTGTATCCTTATGATCACAATGCTGGCTACAGTTCACCAGCAGAGCAGCTTGAGTTTGGTTCTTTGGGACCAATGGGTTTCTCGGGTGTCAATGAACTGTCACAGTCGAATGAGGGAAGTCGATCCGGTGTAGCACTTGAAGAGCAAAGGTTTCATGGTGTCCCTGCCCAACGATCATCACCAGATCAACCCTCTTCACCCCATGTTTCAAGGGCCCCCTGA 4005 0.4347 MGEHEGWAQPPSGLLPNGLLPNEGASVIQALDSERWLKAEQRTAELIACIQPNPPSEERRNAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSENQNLKDTWAHQVRDMLENEEKNENAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDHFCVSLWGPVSISSLPDVSAEPPRKDGGDLLLSKLFLDACSSVYAVFPGGQENQGQPFVSKHFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAYGAKRLARLLDCPEEELSFEVNQFFWNTWDRHGSGQRPDAPSNDLWRLRLSSHDQLQRSENLQNNNHKIDNASNCEFNMEGEHVPRSGLSQYSNLSSENSYKSVVSTVSHSQSQKSYGNQNNSRKFDHVRRETNSNQGAYVDKGQRNVKADNLASDIQGRFLFARTRSSPELTDSYGEVSSQGRRTNATESSKAHNSIAKLENSHRKDLEPDVAARVDESSARHISSRQVLDSAADLNSNHDDSGSGVMGEEFASVPGAGGMQMMHQEEQDLLNMMASPVAQGFSGQAHVPVNIAPGHLPFPFPPSIVASMGYAQRNMGSIPFIEAPWATNMQFPQGFVPSPLTPYFPGIGLTSNPQDLLETNNENFSSVEMNIAEADNDFWHDHERGSASEVEVDNGNFEMLPDDKQQSTSGNFNSAPLSRVGSSRSSSRGQPKFTKENRGSTREEHIDNFHYQDDQRNDIYFDDRTANSELPSAPPSGSFRSRTASESSWEGSLAKSSKSTKEKRGRKNTPSMPSPVYGKGKNTSEISSSQADDENREWTALSTMPSDMAERSTGPTPGTSMHIPRNQISGYETAQTSGSDSPLPIAPVLLGPGSRQRTTDNSGVVPFAFYPTGPPVPFVTMLPLYNFPTESSDTSTSNFNVEEGADNSDSGQNFNSSEGYEQPVVSSPSNSMTRASIESSEHKPDILNSDFVSHWQNLQYGRFCQNSRHPPSMVYPSPVMVPPVYLQGRYPWDGPGRPLSAKMNIFSQLMSYGPRLVPVAPLQSVSNRPANIYQRYVDDMPRYRSGTGTYLPNPVTVRDRHSTNTRRGNYHYDRNDHHGDREGNWNTNSKLRGTGRGHNRNQTEKPSSKPERATSESRVERHWGSHRHESFLSHQNGPVRSNSTQSNPANVAYGMYPIPAMNPSAVSSNGPSIPSVVMLYPYDHNAGYSSPAEQLEFGSLGPMGFSGVNELSQSNEGSRSGVALEEQRFHGVPAQRSSPDQPSSPHVSRAP* 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1228 1334 MobiDBLite consensus disorder prediction 510 538 - -
Apr10g1228 1334 MobiDBLite consensus disorder prediction 812 838 - -
Apr10g1228 1334 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 1332 - -
Apr10g1228 1334 MobiDBLite consensus disorder prediction 1291 1334 - -
Apr10g1228 1334 MobiDBLite consensus disorder prediction 1317 1334 - -
Apr10g1228 1334 MobiDBLite consensus disorder prediction 858 925 - -
Apr10g1228 1334 PANTHER - 1 1332 - -
Apr10g1228 1334 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Apr10g1228 1334 MobiDBLite consensus disorder prediction 743 777 - -
Apr10g1228 1334 MobiDBLite consensus disorder prediction 973 1020 - -
Apr10g1228 1334 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Apr10g1228 1334 MobiDBLite consensus disorder prediction 1180 1208 - -
Apr10g1228 1334 MobiDBLite consensus disorder prediction 778 806 - -
Apr10g1228 1334 MobiDBLite consensus disorder prediction 1143 1168 - -
Apr10g1228 1334 SUPERFAMILY Nucleotidyltransferase 20 201 IPR043519 -
Apr10g1228 1334 MobiDBLite consensus disorder prediction 1126 1208 - -
Apr10g1228 1334 MobiDBLite consensus disorder prediction 740 940 - -
Apr10g1228 1334 CDD NT_PAP_TUTase 59 166 - -
Apr10g1228 1334 Gene3D - 162 358 - -
Apr10g1228 1334 MobiDBLite consensus disorder prediction 510 550 - -
Apr10g1228 1334 MobiDBLite consensus disorder prediction 973 1024 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1228 Apr-Chr10 24678382 24686192 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1228 - - gmx:100809742 2311.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1228 10 24678382 24686192 Apr10g1228 10 24678382 24686192 ECH
Apr10g1228 10 24678382 24686192 Apr4g0917 4 7426742 7435564 ECH
Apr4g0917 4 7426742 7435564 Apr10g1228 10 24678382 24686192 PCT