Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1219 ATGGCAAATATTAGATCTTGGACTCAGTTATGGCCATTTTTTGTCAGGCTGTGTATTCTGAAACTTGTCGTGGATTTCAAAATCTTAACATTGGCGTATGACAGTGGAAGTAGTGGTTTTGCAGCAGGAAATGCTTGCAAGAACACAAATTATCAAAATTTCCTCCCTCCACCGTACCAGAATATATCCCATATGATATGCACGCCTGTATGGCATACATATGAGTTGAGGTACATCCAGAATGATGGTACCACAACCATCTTATTATCTGCTCCCTACACTATAGGGTGGGTAGGAATTGGATTTTCTAAAGATGGTATGATGGTTGGTTCCAGTGCAATGGTGGGATGGATTAGTAAACATGGTCATGCAAAAATCAAGCAATTTTACTTAAGGGGTAGGAAGTCATCAGAAGTCATTGTAGACAAAGGTGAACTACCTCTCAATAATGTGCCCGCGGCTGTGGCAACTAATGGGGCTGAAATTCATTTGGCATTTCAGTTACAGATGACAACTCCGCTTGAGAGACAACCAATTCTATTGGCTTTTGGCAGTAAATATCCACAGAACCACCACCTCTCCAAGCATGAAGACAAAACAGCTATTATATTTGATTTTTCTTCAGGCTCTTCGGGTCCTGTATCCCATGAGTTGATTCAGATAAGGAAGAACCATGGAATAGTGGGTATAATAGGGTGGGGTCTAATCCTCCCCGTGGGGGCAATTGTTGCTAGATACTTCAAGCATAAGGATCCCCTATGGTTCTATCTCCATGCAGCAATTCAATTTGTGGGATTCACATTCGGGATTTGTACAGTCCTTCTTGGATTACAACTCTATTCCAAAATGCATGCCCATATACCAGCTCATAGAGGCATAGGCATCTTTGTCATGGCACTAAGTATTCTTCAGATATCGGCATTCTTCTTGAGACCAAACAAGGATTCCAAGATGCGAAAAATTTGGAATTGGTACCACAGTTGGTTTGGAAGGTTGGCACTTTTATTTGCAGCCATTAATATAGTGTTGGGAATGCAAGCTGCGGGGGCAGGAAGTGATTGGAAGATAGGTTATGGATTTCTTGTTGGTACAGTAGTTGTAACAGCTATCGTTCTTGAAGTATTGGCTTATTTGAAAAGATCAGAATCTCTACCTCCTAACTTCCAAGTGGACCCCGTTGGAGAAGCTTCATTTCCAAGGGGAATGTGA 1209 0.4169 MANIRSWTQLWPFFVRLCILKLVVDFKILTLAYDSGSSGFAAGNACKNTNYQNFLPPPYQNISHMICTPVWHTYELRYIQNDGTTTILLSAPYTIGWVGIGFSKDGMMVGSSAMVGWISKHGHAKIKQFYLRGRKSSEVIVDKGELPLNNVPAAVATNGAEIHLAFQLQMTTPLERQPILLAFGSKYPQNHHLSKHEDKTAIIFDFSSGSSGPVSHELIQIRKNHGIVGIIGWGLILPVGAIVARYFKHKDPLWFYLHAAIQFVGFTFGICTVLLGLQLYSKMHAHIPAHRGIGIFVMALSILQISAFFLRPNKDSKMRKIWNWYHSWFGRLALLFAAINIVLGMQAAGAGSDWKIGYGFLVGTVVVTAIVLEVLAYLKRSESLPPNFQVDPVGEASFPRGM* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1219 402 PANTHER MEMBRANE PROTEIN-LIKE 32 388 - -
Apr10g1219 402 ProSiteProfiles DOMON domain profile. 72 184 IPR005018 -
Apr10g1219 402 CDD DOMON_DOH 73 201 IPR045266 -
Apr10g1219 402 SMART 561_7 224 345 IPR006593 -
Apr10g1219 402 CDD Cyt_b561_FRRS1_like 204 374 - -
Apr10g1219 402 Pfam Eukaryotic cytochrome b561 239 346 IPR006593 -
Apr10g1219 402 Gene3D - 200 383 - -
Apr10g1219 402 ProSiteProfiles Cytochrome b561 domain profile. 187 381 IPR006593 -
Apr10g1219 402 SMART DOMON_3 97 184 IPR005018 -
Apr10g1219 402 Pfam DOMON domain 80 143 - -
Apr10g1219 402 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 32 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1219 Apr-Chr10 24550717 24553092 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1219 - - gmx:100807608 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1219 10 24550717 24553092 Apr10g1219 10 24550717 24553092 ECH
Apr4g0923 4 7493388 7495886 Apr10g1219 10 24550717 24553092 PCT