Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1218 ATGATGGAATGGTCTTCAAAATATGCTGCAAGGGCTTACCTAGATACCCTTCAACTGTGTAACAATCATAAAAGACAATATGGCACTTGGAGAATTCAAGAGCCAGGAAGAAATGAATTTGTATCAGCATTAGCAGCAGGAATGAAAGCAAAACTCATATTGGAAGTGACATCACGTGTATCCCTATCCACAATTGCCCTAGCAGCTGCTGCTAGATACACTGGAGGCAAGCTTGTGTGTATTCTTCCTGAGACAGTCCTTGATGAATCAAAAGAAGTTATTAACAACTCAGGGCTTGAAGACCAAGTAGAATTTAGAACTGAAGACCCCTCCAAGCTACTTCCCTACTATGAAAACATTGATTTCTTCCTTGTTGATTGCAAAGATGAAAACTATACAAGGTTGCTCAACTTGGTGGATGTAAACCCAACAAGATCTATAGTCGTGGCAAAAAACCTGGGTGGTGATGGTGATAAAAAAGGGCTAGGAGGGTATCTTAGAGTAAAGGACAAGAAATTAGCAGTAAGATCTCTAAAGCTTCCCTTAGGGAAAGGCATGCAAGTTACTAGGATTAGCAATAATGATGACTCTAATGAGAGACATGGGATTAGAGGAGAATACAGCAGGAAATGGAGAAAGAGTTCATGGGTTGTCAAATATGATGAGGAGAGTGGTGAGGAACATATATACAGGGTACCTCAGGTTGATTGGTTCTGGGGTTAA 723 0.4053 MMEWSSKYAARAYLDTLQLCNNHKRQYGTWRIQEPGRNEFVSALAAGMKAKLILEVTSRVSLSTIALAAAARYTGGKLVCILPETVLDESKEVINNSGLEDQVEFRTEDPSKLLPYYENIDFFLVDCKDENYTRLLNLVDVNPTRSIVVAKNLGGDGDKKGLGGYLRVKDKKLAVRSLKLPLGKGMQVTRISNNDDSNERHGIRGEYSRKWRKSSWVVKYDEESGEEHIYRVPQVDWFWG* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1218 240 PANTHER DUF1442 FAMILY PROTEIN 2 234 - -
Apr10g1218 240 PANTHER DUF1442 FAMILY PROTEIN 2 234 IPR009902 -
Apr10g1218 240 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 139 IPR029063 -
Apr10g1218 240 Gene3D Vaccinia Virus protein VP39 6 196 IPR029063 -
Apr10g1218 240 Pfam Protein of unknown function (DUF1442) 4 231 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1218 Apr-Chr10 24547918 24549448 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1218 - - gmx:102660803 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1218 10 24547918 24549448 Apr10g1218 10 24547918 24549448 ECH
Apr4g0924 4 7497571 7498974 Apr10g1218 10 24547918 24549448 PCT