Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1178 ATGTCACACAAAGCATTCATCACACCAACTCTTATGTCTCTTTTCTTCTCTGTGGTTCTTTGCACACCTCCAGAGGACCCAATAAAGTGCTCATCAAAGAACACAAGCTGCACTATCACAAACTCCTATGGAATCTTCCCTGATCGAAGCATCTGCAAAGCTGCTCAAGTGTTGTACCCAACCACTGAAGAAGAGCTTTTGTCAATGGTTGCATCAGCAACAAGAAACAAAACTAACATGAAAGTTGCCACACGTTTTTCCCACAGCATACCCAAGTTGGTGTGTCCTGAAGGCCAAAATGGGTTGCTTATAAGCACCAAATATCTGAACCAAATATTGAAGGTTGATGTGGAAGCAAAGACAATGACAATGGAGAGTGGTGTGACAATGAAACAACTCATCAACGAGGCTGCAAAGGTGGGCTTGGCCTTGCCATATGCACCATATTGGTGGGGTTTGACAATTGGGGGGCTTATGGGAACCGGTGCTCATGGAAGCACTTTGTCGGGTAAAGGAAGTTCTGTTCATGATTATGTGGTTGAGCTTAGAATTGTTAGGCCAGCAAGTCCTAAAGATGGATATGCTAACGTTGAGACACTAAATGAACAACATGAAGATCTCAATGCAGCCAGAGTATCACTGGGTGTTCTAGGAGTTATTTCACAGATTACTCTAAAACTAGAACCTCTCTTCAAGCGATCAATCACGTATCTGGCAAAAGATGATTCAGATTTGGGAGAACAAGTGGCTGGATTTGGTCATGCACATGAGTTTGCGGATATAACGTGGTACCCAAGTCAACACAAGGTTGTCTACCGTGTTGATGATCGTGTCCCAACCAATACATCGGGCAATGGTCTCTATGACTTTATTCCTTTCCGTCCCACTCCTTCGCTTGAATTGGCTCTCATAAGAACCACAGAGGATATTCAAGAATCCACTAGTGATGCCGATGGAAAGTGCAGAATTGCTAAGACAACAACGACTGCCCTCATCGCCACTGCTTTTGGACTTACTAACAATGGTATAATCTTTACTGGATATCCTGTAATTGGATTTCAGAACCGGCTTCAGGCATCTGGGTCATGCTTGGACAGTCTTCAAGATGCAAAGATCACAGCATGTGCATGGGATTCCAGGGTGAAAGGAGAGTTCTTTCACCAAACCACATTTAGCGTTGGGTTGTCTGTTGTAAAAAATTTCATTGAAGATGTACAAAAGCTAGTTCAATTGGAGCCCAAGGGCTTGTGTGGCATAGAGCTTTACAATGGAATTCTCATGCGTTATGTGAAGGCTTCAAGTGCATACTTGGGGAAGCAAGAGGATGCATTAGACTTTGATATCACATACTACCGTAGCAAAGATCCAATGACTCCTAGGCTTTACGAAGACATTCTTGAAGAAGTTGAACAACTTGGAATATTCAAGTATGGAGGGTTACCTCATTGGGGTAAGAATAGGAACTTGGCATTTGAAGGGGCCATCAAAAAGTACAAAAATGCTGATAAATTTTTTACTGTTAAAGAGAAGTATGATTCACAAGGGCTTTTCTCAAGTGAATGGACAAATCAAATACTTGGGTTAAAAGATGGGGTGACAACACTGAAAGATGGGTGTGCATTAGAAGGTTTGTGCATTTGCTCACAGGATAGCCATTGCAATCCTAGTAAAGGCTACTTTTGTAGACCAGGGAAAGTCTACAAGGAAGCAAGGGTTTGTACTCATTTAACATCCAAGTGA 1740 0.4241 MSHKAFITPTLMSLFFSVVLCTPPEDPIKCSSKNTSCTITNSYGIFPDRSICKAAQVLYPTTEEELLSMVASATRNKTNMKVATRFSHSIPKLVCPEGQNGLLISTKYLNQILKVDVEAKTMTMESGVTMKQLINEAAKVGLALPYAPYWWGLTIGGLMGTGAHGSTLSGKGSSVHDYVVELRIVRPASPKDGYANVETLNEQHEDLNAARVSLGVLGVISQITLKLEPLFKRSITYLAKDDSDLGEQVAGFGHAHEFADITWYPSQHKVVYRVDDRVPTNTSGNGLYDFIPFRPTPSLELALIRTTEDIQESTSDADGKCRIAKTTTTALIATAFGLTNNGIIFTGYPVIGFQNRLQASGSCLDSLQDAKITACAWDSRVKGEFFHQTTFSVGLSVVKNFIEDVQKLVQLEPKGLCGIELYNGILMRYVKASSAYLGKQEDALDFDITYYRSKDPMTPRLYEDILEEVEQLGIFKYGGLPHWGKNRNLAFEGAIKKYKNADKFFTVKEKYDSQGLFSSEWTNQILGLKDGVTTLKDGCALEGLCICSQDSHCNPSKGYFCRPGKVYKEARVCTHLTSK* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1178 579 Pfam D-arabinono-1,4-lactone oxidase 389 524 IPR007173 GO:0003885|GO:0016020
Apr10g1178 579 Gene3D - 111 229 IPR016169 -
Apr10g1178 579 PANTHER GULONOLACTONE OXIDASE 8 576 - -
Apr10g1178 579 Gene3D - 388 488 - -
Apr10g1178 579 TIGRFAM pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase 23 574 IPR010030 -
Apr10g1178 579 Pfam FAD binding domain 55 187 IPR006094 GO:0050660
Apr10g1178 579 PANTHER D-ARABINONO-1,4-LACTONE OXIDASE-LIKE PROTEIN 8 576 - -
Apr10g1178 579 SUPERFAMILY FAD-binding/transporter-associated domain-like 48 229 IPR036318 GO:0050660
Apr10g1178 579 ProSiteProfiles PCMH-type FAD-binding domain profile. 50 230 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1178 Apr-Chr10 24059578 24065493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1178 K00103 - gmx:100790483 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1178 10 24059578 24065493 Apr10g1178 10 24059578 24065493 ECH