Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1162 ATGGCCACAACCTCCTCTTCTGCTCTCACTATATCCTCTTCAACCACCCTTGTTGATGGCAAGGCTCCAAGACAATCACCATCAACTACCCCACAATGTGTGAGCCTTCCCACTCTTCCCCCTCCACCTTTGCAATCTCATAACCGTTCATGGAAAACCACTGTTTATTGTCGCAAGATTGCTCGCAATGTTATGGCAATGGCCACAGGAGAGGCACCAGCTGAAGTTGCCGCAACTGAGTTGCCAGAGTTTGTTAAGACTCTTCAAGAAGCTTGGGACAAAGTTGATGACAAATATGCAGTTAGTTCACTGGCTGTGGCTGGTGTGGTTGCATTGTGGGGCTCAGCTGGTTTGATCTCAGCAATTGATAGGCTTCCTTTAATTCCTGGGGTTCTTGAGGTTGTAGGCATTGGCTACACTGGGTGGTTTGCCTACAAGAACATAGTTTTCAAGCCAGACCGGGAAGCTTTGATTCGGAAAATAAAAGAAACATATAATGAAATAATTGGGAGCAGCTAA 519 0.4624 MATTSSSALTISSSTTLVDGKAPRQSPSTTPQCVSLPTLPPPPLQSHNRSWKTTVYCRKIARNVMAMATGEAPAEVAATELPEFVKTLQEAWDKVDDKYAVSSLAVAGVVALWGSAGLISAIDRLPLIPGVLEVVGIGYTGWFAYKNIVFKPDREALIRKIKETYNEIIGSS* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1162 172 PANTHER PROTEIN CURVATURE THYLAKOID 1B, CHLOROPLASTIC 1 172 - -
Apr10g1162 172 PANTHER - 1 172 IPR033344 GO:0009579
Apr10g1162 172 MobiDBLite consensus disorder prediction 1 33 - -
Apr10g1162 172 MobiDBLite consensus disorder prediction 1 49 - -
Apr10g1162 172 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 86 170 IPR025564 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1162 Apr-Chr10 23859874 23862100 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1162 - - zju:107423796 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1162 10 23859874 23862100 Apr10g1162 10 23859874 23862100 ECH