Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1159 ATGGCCACTACAACCCAAAAGCCACTCATCACTGACTTAGCCTCCACCGTGAATCGTGTACCCTCTAATTTCATTAGGCCCCTTTATGACCGTCCAAACCTTCAACAACTTCAATCCTCCACCGCTTCCATTCCCATCATCGACCTTCAAGGTCTTGATGACTCCAATCGTTCACAGATCATCCAAAACATTGCCCATGCTTGCCAAAACTATGGCTTTTTTCAAATTGTGAATCATGGAGTTCCAGTGGAGGTGGTGAGTAGCATGGTGAATGTGTCAAAAGAGTTCTTCCAATTGCCAGAGGGGGAGAGGTTGAAAAACTACTCTGATGACCCATCCAAAACAACCAGGCTTTCAACCAGTTTCAATGTCAAGACTGAAAAAGTTTCTAATTGGAGGGACTACTTGAGACTTCACTGCCACCCCCTCGAGGATTACATTCAAGAATGGCCAACCAACCCTCCATCTTTCAGGGACGATGTTGCAGAGTATAGTAGAAAGATGAGAGAGTTATCAATGAAATTACTAGAGGCAATATCAGAGAGTTTGGGGTTGGAAAGGGATTACATAGATAAAGCATTAGGGAAACATGGGCAGCACATGGCCATAAATTACTACCCTCGATGTCCTGAGCCAGAGCTAACATATGGATTGCCAGCTCATGCTGACCCAAATGCCATTACCATTCTCCTCCAAAATGAGGTTCCTGGTTTGCAAGTCCTCAATCATGGCAAGTGGGTAACCGTCAATCCTGTCCCTAACACCTTCATCGTCAACATTGGCGACCAAATTCAGGTGATAAGCAACGATAGGTACAAGAGTGTGTTGCATCGAGCTTTGGTGAATTGTGAGAAGGAGAGGATGTCCATTCCCACATTCTACTGTCCTTCACCAGACGCAGTGATAGGGCCAGCTCCTCAACTCGTAGACCATCACCATCCTCCTCAGTACACAAACTTCACATACAGTGAATACTACGACAAGTTCTGGAATAGAGGACTCTCAAAAGAAACTTGCGTCGACATGTTCAAGGCTCCAAATTAA 1044 0.4511 MATTTQKPLITDLASTVNRVPSNFIRPLYDRPNLQQLQSSTASIPIIDLQGLDDSNRSQIIQNIAHACQNYGFFQIVNHGVPVEVVSSMVNVSKEFFQLPEGERLKNYSDDPSKTTRLSTSFNVKTEKVSNWRDYLRLHCHPLEDYIQEWPTNPPSFRDDVAEYSRKMRELSMKLLEAISESLGLERDYIDKALGKHGQHMAINYYPRCPEPELTYGLPAHADPNAITILLQNEVPGLQVLNHGKWVTVNPVPNTFIVNIGDQIQVISNDRYKSVLHRALVNCEKERMSIPTFYCPSPDAVIGPAPQLVDHHHPPQYTNFTYSEYYDKFWNRGLSKETCVDMFKAPN* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1159 347 PRINTS Isopenicillin N synthase signature 64 81 - -
Apr10g1159 347 PRINTS Isopenicillin N synthase signature 221 242 - -
Apr10g1159 347 PRINTS Isopenicillin N synthase signature 256 282 - -
Apr10g1159 347 Pfam non-haem dioxygenase in morphine synthesis N-terminal 44 152 IPR026992 -
Apr10g1159 347 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 196 296 IPR005123 -
Apr10g1159 347 SUPERFAMILY Clavaminate synthase-like 14 333 - -
Apr10g1159 347 Pfam 2OG-Fe(II) oxygenase superfamily 199 296 IPR044861 -
Apr10g1159 347 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 5 339 - -
Apr10g1159 347 Coils Coil 161 181 - -
Apr10g1159 347 PANTHER PROTEIN DMR6-LIKE OXYGENASE 2-LIKE 5 339 - -
Apr10g1159 347 Gene3D - 10 333 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1159 Apr-Chr10 23838419 23841186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1159 13 344 Glycosyltransferase AT5G59530 32.353 1.80e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1159 K24028 - gmx:100788012 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1159 10 23838419 23841186 Apr10g1159 10 23838419 23841186 ECH