Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1146 ATGATCTCAAGTAAAAGAAATGCTTTTGGCACCAAGAGAAAGATGGGTCTGGATTTCAAGGTTTTGATGGTGATGGTCTCATGGTTTTGTTTGATTCCTGTATGTGTATCAACCACAAAACAAGTATACCCACCACCACAACAACATAACCCGAAGTTAAGGTTTGGTCAAAATGGAGAATTCAAGATATTGCAGGTGGCAGATATGCACTATGCAGATGGCAAGACCACACCTTGCTTGGATGTGCTCCCTTCTCAAAATGTTTCTTGCTCTGATCTCAACACCACTGCCTTTCTTCATAGAATGATCCTAGCTGAGAAGCCTAATCTTATTGTCTTCACTGGAGATAATATATTTGGGTTTGATTCGTCCGATTCAGCCAAGTCCTTGGATGTTGCATTTGCTCCTGCAATTGCATCAAACATTCCTTGGGTAGCTGTTTTGGGCAACCATGACCAGGAAGGATCTCTCTCTAGGGAAGGGGTGATGAAACATATAATTGGGATGAAAAACACCTTATCTAAATTCAATCCTCCAGAAGTACATATCATTGATGGTTTTGGGAACTATAATTTGGAGGTTGGAGGAATTGAAGGCACTGGTTTTGAAAACAAGTCAGTGCTCAATCTGTATTTTCTTGATAGTGGAGATTATTCCAAAGTTCCTTTAATTTTTGGTTATGATTGGATCAAGCCCTCCCAGCAACTTTGGTTCCAACGAACATCAGCAAAGCTTCGGAAAGCATACATAAGTGGACCAATGCCTCAGAAAGAAGCTGCTCCTGGTCTTGCATATTTTCACATCCCTTTACCGGAATATACTAGTTTTGATTCATCAAACTTCACAGGTGTGAAACAGGAGCCGGATGGCATTAGCTCTGCTTCTGTGAACTCTGGCTTCTTCACAACCTTGGTTGCAGCAGGAGATGTGAAGGCAGTTTTCACAGGCCATGATCACATCAATGACTTCTGTGGCAAACTAACAGGTATACAACTTTGTTATGGTGGGGGATTTGGATACCATGCTTATGGAAAGGCTGGATGGTCTAGGAGAGCAAGAGTGGTGGTAGCTAGCTTGGAGAAAACGGAGAAAGGAAGTTGGGGAGATGTTAAGTCAATTAAAACATGGAAACGCCTTGATGATCAACATCTTTCTGGAATCGATGGCGAGGTCCTATGGAGCAAGAGCTTTGGCGGTAACCCTGGCAAAATACAAAATGGTGGCACTTGA 1230 0.4236 MISSKRNAFGTKRKMGLDFKVLMVMVSWFCLIPVCVSTTKQVYPPPQQHNPKLRFGQNGEFKILQVADMHYADGKTTPCLDVLPSQNVSCSDLNTTAFLHRMILAEKPNLIVFTGDNIFGFDSSDSAKSLDVAFAPAIASNIPWVAVLGNHDQEGSLSREGVMKHIIGMKNTLSKFNPPEVHIIDGFGNYNLEVGGIEGTGFENKSVLNLYFLDSGDYSKVPLIFGYDWIKPSQQLWFQRTSAKLRKAYISGPMPQKEAAPGLAYFHIPLPEYTSFDSSNFTGVKQEPDGISSASVNSGFFTTLVAAGDVKAVFTGHDHINDFCGKLTGIQLCYGGGFGYHAYGKAGWSRRARVVVASLEKTEKGSWGDVKSIKTWKRLDDQHLSGIDGEVLWSKSFGGNPGKIQNGGT* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1146 409 SUPERFAMILY Metallo-dependent phosphatases 59 368 IPR029052 -
Apr10g1146 409 PIRSF Ptase_At2g46880 8 393 IPR011230 -
Apr10g1146 409 CDD MPP_Dcr2 59 344 - -
Apr10g1146 409 Gene3D - 60 364 IPR029052 -
Apr10g1146 409 Pfam Calcineurin-like phosphoesterase 61 320 IPR004843 GO:0016787
Apr10g1146 409 PANTHER - 26 396 - -
Apr10g1146 409 PANTHER PHOSPHOESTERASE, METALLO-DEPENDENT PHOSPHATASE-LIKE PROTEIN-RELATED 26 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1146 Apr-Chr10 23711437 23715076 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1146 - - gmx:100794167 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1146 10 23711437 23715076 Apr10g1146 10 23711437 23715076 ECH