Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1129 ATGCGGAAATCCGCTGCAGACAGATTCAGCCACGTTTTCATCCGTTCACTTCTTCTTCGCCATCGCCATCACTATCACTATCAGCATCATCGTCATCATCTTCCTCCTTCTATCTCTTCTCTCCCCACATCTCGTTTCTTCTCTTCTACTGCTTCTTCCTCAATGGCTTCCCCCCCCTCTGATTCCCCTTTCCCTGTAACTGTCCAAAACATCAATCCCAAGGTTCTGAAATGTGAGTATGCAGTTAGAGGAGAGATTGTTACACTTGCCCAGAATTTGCAAAAAGATTTACAGGCCAATCCAGGCTCTCATTCATTTGAAGAGATACTTTACTGCAACATTGGAAATCCTCAGTCTCTTGGCCAGTCTCCAATAACTTTTTTCCGAGAGGTTCTTGCATTATGTGATCATCCAGCTATTTTGGACAAAAGTGAAACACAGGGTTTGTTCAGCGCTGATGCAATAGAACGAGCTTGGCAGATTGTGGATCAGATTCCTGGAAGAGCAACTGGTGCCTATAGTCATAGTCAGGGTGTCAAGGGCTTGCGTGATACAATAGCTGCTGGAATTCAAGATCGTGATGGTTTTCCTGCCAATCCTGATGACATTTTCATGACAGATGGTGCAAGCCCAGCAGTCCATAACATGATGCAATTACTCATTAGATCAGAAAGTGATGGTATTCTGTGTCCCATCCCTCAGTATCCTCTGTACTCAGCCTCAATTGCCCTCCATGGTGGCTCCCTGGTACCTTATTATCTAGATGAAGCTACTGGTTGGGGGTTGGAAATACCAGAACTAAAGAAGCAATTGGAGGCCGCCAAGTCTAAGGGCATCAATGTTAGGGCTTTAGTTGTTATAAATCCTGGCAATCCAACAGGGCAGGTTCTTGCTGAGGAAAATCAGCGGGATATAGTAGAATTTTGCAAGCAAGAAGGTCTGGTTCTTTTAGCCGATGAGGTATATCAAGAAAATGTTTATGTTCCTGAGAAGAAATTTCACTCTTTCAAGAAGGTATCTCGGTCCATGGGATATGGTGACAAAGATATCACCTTAGTATCTTTTCAGTCAGTCTCCAAAGGCTATCATGGCGAGTGTGGGAAACGAGGAGGTTACATGGAGGTGACTGGGTTTTCTCCAGAAGTGAGGGAACAAATATATAAAGTGGCATCTGTGAACCTTTGTTCTAATATCTCTGGTCAAATTCTTGCAAGCTTGGTCATGAGTCCACCTAAGGTTGGAGACGAGTCCTATGAGTCATTCATGGCTGAGAAGGGGAATATTTTGGCGTCCCTTGCTAGACGTGCAAAGACACTGGAAGATGCTTTCAACAATTTAGAGGGTGTAACATGCAACAAAGCTGAAGGAGCAATGTATCTGTTCCCCCGAATTTGCCTGCCCGAAAAAGCTATCCAAGCTGCAGGGGCTGCAAATACAGCACCTGATGCCTTCTATTGTAAACGCTTGCTTAATGCCACAGGAGTTGTTGTTGTTCCTGGTTCTGGTTTTGGACAGGTTCCTGGAACATGGCATTTTAGGTGCACCATTTTGCCTCCAGAAGAGAAGATACCAGCCATTGTCACCCGCTTGACAGAGTTCCATAAAAAATTCATGGATGAGTTCCGTGACTGA 1632 0.4467 MRKSAADRFSHVFIRSLLLRHRHHYHYQHHRHHLPPSISSLPTSRFFSSTASSSMASPPSDSPFPVTVQNINPKVLKCEYAVRGEIVTLAQNLQKDLQANPGSHSFEEILYCNIGNPQSLGQSPITFFREVLALCDHPAILDKSETQGLFSADAIERAWQIVDQIPGRATGAYSHSQGVKGLRDTIAAGIQDRDGFPANPDDIFMTDGASPAVHNMMQLLIRSESDGILCPIPQYPLYSASIALHGGSLVPYYLDEATGWGLEIPELKKQLEAAKSKGINVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGDKDITLVSFQSVSKGYHGECGKRGGYMEVTGFSPEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESFMAEKGNILASLARRAKTLEDAFNNLEGVTCNKAEGAMYLFPRICLPEKAIQAAGAANTAPDAFYCKRLLNATGVVVVPGSGFGQVPGTWHFRCTILPPEEKIPAIVTRLTEFHKKFMDEFRD* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1129 543 Coils Coil 429 449 - -
Apr10g1129 543 PANTHER ALANINE AMINOTRANSFERASE 62 542 IPR045088 GO:0008483
Apr10g1129 543 PANTHER ALANINE AMINOTRANSFERASE 2 62 542 - -
Apr10g1129 543 CDD AAT_like 156 532 - -
Apr10g1129 543 SUPERFAMILY PLP-dependent transferases 69 537 IPR015424 -
Apr10g1129 543 Gene3D Aspartate Aminotransferase, domain 1 69 541 IPR015422 GO:0003824
Apr10g1129 543 Gene3D - 120 170 - -
Apr10g1129 543 Gene3D - 171 417 IPR015421 GO:0003824
Apr10g1129 543 Pfam Aminotransferase class I and II 168 525 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1129 Apr-Chr10 23575182 23580914 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1129 K00814 - gmx:100127413 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1129 10 23575182 23580914 Apr10g1129 10 23575182 23580914 ECH