Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1128 ATGGACCTCCCTGGCCACAAATTCTTCCAAGCTCCATCTACATTGGTACCACATGGGGAATCACTCACTGAGAGCAACATGAGCTTGTATGGGAAAAGCAAAGACAACCCTTTTGTAGATGCATTCCCTGACCCACTTTGCAAGTTAAATTTAAAAGAGACTTCTGAGTTTGTGAAGTCATTTCCAATGTCAAATGGTAATGCTGAAAACAGAGAACAGTCTGTTTCACAACAGAGGAGATTAGAGGCTCCTTCAACACCTGGTAGACCCGTTTTTAGCTTTAGTTCTTCTGGTGTTGGAAGAAACCTTCCAAGAAAGAGTTTCCCTTCCAAATGGGATGATGCAGAGAAATGGCTCATGAACAGTTCATGCAATGACTCACCAGCTCATAACAACACTTTGAAAGCCTCAAACATCACAAACAAACAACAATGTGATAACCTTAAGCGACAAATTGAGGATTTCTCGGAGAAATCAAGGGTCACAGAAGAAAGGGTGTCCAAAGCTGTCCAAAACTTTCAGTGGTCTTCATCTTTGGACCACCACCATAACACATTCAGCGCTTTCAATGGGATCACAGACATTGTACTAAAAGATAAGTTCACAGACAGCATAGAGCCTATTTTGCCAAATTTGAGATATTCAGAACCAGCTAAAGAAGGGTTCTTGTTTAGAAACCAAGGTGGGGAAGCAATGCAAGATGCTTGCACAGAAGTTGTTGAACACAGAGATGTTGGGACAGAGATGACTCCAATGGGAAGTTCCACAACTTCAAGATGCCACACCCCATTTAAGAGTTCATCACCTGCACGTCATAACACTCCTGCAAGTAGGTCAGGACCATTGGCTTTGGCTAACAACACCAACAGCACTGCTTGCAGTCTCGATGTTATTCAGCTTGAGGAGTGCCATTTTTCTAAGCTTCAACTAGGATCACAGTATGATTTAGTCACTTCAAATTGGAGCTCGAGTGAAGAGGAAGAGAAGGAAATATCAAAAAGTTTGAGGCATAATGCAAGCCAGAAAGCTGATTCAGACTGCATTGCTGCTACATGGGAAGAAGAGGAGAAGACCAAGTGTTGTCTTAGGTATCAAAGAGAAGAAGCAAAAATCCAAGCTTGGGTAAACCTCCAGAGTGCTAAAGCAGAAGCCCGGTCAAGAAAGCTTGAGGTGAAAATACAAAAGATGAGATCAAACCTGGAAGAGAAGTTGATGAAGAGGATGTCAATAGTTCACAGGAAAGCTGAGGATTGGAGAGCAACAGCAAGACAACAACATTTGGACCAAATCCACAAGGCCACTGAACAAGCTCAAAAGATGATCCATAAACATAACACTCAATTTTCGAGGCCCAGTTCATGCGGTTGTTTCCCTTGCCATAACAAGTAA 1389 0.4248 MDLPGHKFFQAPSTLVPHGESLTESNMSLYGKSKDNPFVDAFPDPLCKLNLKETSEFVKSFPMSNGNAENREQSVSQQRRLEAPSTPGRPVFSFSSSGVGRNLPRKSFPSKWDDAEKWLMNSSCNDSPAHNNTLKASNITNKQQCDNLKRQIEDFSEKSRVTEERVSKAVQNFQWSSSLDHHHNTFSAFNGITDIVLKDKFTDSIEPILPNLRYSEPAKEGFLFRNQGGEAMQDACTEVVEHRDVGTEMTPMGSSTTSRCHTPFKSSSPARHNTPASRSGPLALANNTNSTACSLDVIQLEECHFSKLQLGSQYDLVTSNWSSSEEEEKEISKSLRHNASQKADSDCIAATWEEEEKTKCCLRYQREEAKIQAWVNLQSAKAEARSRKLEVKIQKMRSNLEEKLMKRMSIVHRKAEDWRATARQQHLDQIHKATEQAQKMIHKHNTQFSRPSSCGCFPCHNK* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1128 462 PANTHER OS11G0616300 PROTEIN 1 460 - -
Apr10g1128 462 Pfam Remorin, C-terminal region 349 446 IPR005516 -
Apr10g1128 462 PANTHER OS02G0116800 PROTEIN 1 460 - -
Apr10g1128 462 Coils Coil 138 165 - -
Apr10g1128 462 MobiDBLite consensus disorder prediction 249 283 - -
Apr10g1128 462 MobiDBLite consensus disorder prediction 62 98 - -
Apr10g1128 462 MobiDBLite consensus disorder prediction 247 283 - -
Apr10g1128 462 Coils Coil 379 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1128 Apr-Chr10 23568855 23572997 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1128 - - gmx:100776089 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1128 10 23568855 23572997 Apr10g1128 10 23568855 23572997 ECH