Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1126 ATGGATGTCGTGGACAAGACTTTTTCTGATCTTGTCGGCATTATCAAATCATGGATTCCCTGGCGATCTGAGCCAGCAAATGTGTCAAGGGATTTTTGGATGCCCGACCAGAGTTGTAGAGTATGCTACGAGTGTGATTCCCAGTTCACCTTATTTAATCGTAAACACCACTGTCGTCTTTGTGGACGAATTTTCTGTGCCAAGTGTACAACAAATTCAGTTCCTGCCCCATTTAGCAGCCAAAGGAATTCTTGGGATGAGTTGGAAAAGATTCGTGTGTGCAATTATTGTTACAAGCAATGGGAGCAGGGTGTAGTTGCTTTGGATAACAGTGTTCAGATTTCCAATCTGGATCATAGTACTTCGGAATCAACTTCGAGCTTGGCTAGCAGTAAAACTAGTGCCACTGCAATCAGTAGTAACATTACTCTTTGCTCCATGCCTTATTCAGTTGGGTCTTACAAACAAGTGCAACAGGGTTCCGTTCTGAACTTGCATCAATCACCTGTGAAGGGAAAAGACATTGATAGGGAAGGTTTATCAGCACTAGGAGGGAGGAATGATCTTGTAGCAGATCTAGGTGATCCATTACCAAAGCAATATGAATTCTCAATAAACAGGAGTGATGATGATGAGGATGAGTATGGTGTATATCAGTCAGATTCTGATATGAGGCATTATCCTCAAGTGAATAGCTACTATGGACAAGCTGAGGTTGATGGGATAAGCAACATTGATGGCTCGCAGAAAGTGCATCCTGATGGAGAAAACATTAATGCAAATCTCTCTTCAAACTACAGTTTTGACACACAGGGTTTAGAAGGAACCCCAGTTATTGCAAAAAATGAAGACGACCCTGATATCTGTGATGAAAATGAAGCACCTTCCTCATTATATGTTTCAGAGGATGTTGACACTGAACCCGTTGATTTTGAAAATAATGGACTTCTCTGGCTCCCTCCTGAACCAGAAGATGAAGAAGATGAACGTGAAGCTATTTTGTATGATGATGATGATGACAATGATGTGAATGCCAGTGGAGAGTGGGGATACCTGCGCAGTTCAAGCAGTTTTGGAAGTGGGGAGTATCGACACAGAGATAGATCAAGTGAGGAGCAGAAAAATGTAATGAAGAATGTAGTTGATGGGCATTTTAGGGCATTGGTAGCTCAGCTGTTACAGGTTGAAAACCTTACTGTTGAAGAAAATGACAAAAATAGTTGGTTGGAGATTGTCACATCCCTGTCATGGGATGCTGCTACTCTATTGAAACCAGATATGAGCAAAAGTGGAGGGATGGACCCTGCTGGTTATGTGAAAGTTAAATGCATAGCATGTGGGAACCGCTTTGAAAGTGTGGTGGTTAAAGGAGTTGTTTGCAAGAAAAATGTGGCTCATCGGCGAATGACGTCAAAAGTAGATAAACCTCGCTTGTTAATCCTTGGAGGGGCTCTAGAGTACCAACGTGTTACCAATCTCTTATCTAGTGTCGATACCTTATTGCAGCAGGAAATGGACCATCTGAAGATGGCAGTGGCAAAGATAGCTGCACACCAGCCAAACATTTTGTTAGTAGAGAAATCAGTTTCGCGATATGCACAGGAATATCTTCTTGCTAAAGACATTTCTCTTGTTCTCAATGTCAAGAGACCACTTCTGGAGCGCATAGCTCGTTGCACAGGCACTCAAATAGTGCCTTCAATTGATCATCTTTCATCACAAAAGTTGGGTTACTGTGAAACATTTCATGTTGAAAAGTTTGTTGAAGACCTTAACAGTGCTGGTCAAGGTGGGAAAAAAGCAATGAAGACATTGATGTTTTTTGATGGCTGCCCAAAACCATTAGGTTTCACCATTTTACTTAGAGGTGCTGACAAGGATGAACTGAAGAAGGTAAAGCATGTGGTTCAGTATGGAGTTTTTGCAGCTTACCATTTGGCTCTGGAGACATCTTTTCTTGCTGATGAAGGAGTCTCCCTGCCAGAACTTCCATTAAACAGTCTGGCCCTTCCAGATAACCCATCATCCATTCAAAGGTCCATTTCAACAGTTCCTGGTTTCGGTGTTTCTGACAACGAAAAGCCTCAAGGGCATGAACTTGACACCGAAGTACAGAGAACCAAAAGTGTCATGATTTCTGATCTAGCCTCGTCAGCCTTCAGTACAGAACCTGATGTGTCTAATGGTGCTTCTCAATCTATGCCATTTGAATCAAGTCTCAATCTTTCAACTGCCTTTCTCTCCTCCATTGTTGCATCAGGAAATTCAATTCCAGAATCACACCATGATAAGCTTATTTCGTGCACTAGTAGAGACAGAAATGAAATGGAGTCCAAAGACCCTCTAGCAGAAGAAACTTCTGTAGTGGACAACACACTGGGTGTCGGGGATGATCCTACAGTAAATGACCCTGGAACTTTGGAGAAATTATATCAATGCATTTCAGCTGACACTCCTCAAAACGGTCACAGTGAAGTCCCTACAAACCAGTTACATGGGTCAGAATCTTTCTCCCCAAAAGATGGTCAAAACCAACCTGAGATGCTTGGAATCACAATTGAAGAGCAAATTCCCATGAAAGAGGAATTTCCTCCATCACCCTCTGACCATCAAAGCATATTGGTGTCTTTGTCCTCCCGATGCGTATGGAAGGGAACTGTGTGTGAGAGGTCCCATCTTTTTCGAATTAAATACTATGGAAGCTTTGATAAACCATTGGGGCGGTTTCTGCGGGACCATTTATTTGACCAGAGTTATCGATGTGATTCTTGTGATATGCCCTCGGAAGCACATGTGCATTGCTATACACATCGACAGGGAACACTCACCATATCTGTCAAGAAGCTACCAGAAATTATCCTACCCGGTGAAAGGGATGGAAAGATTTGGATGTGGCACAGGTGCCTGCGATGTCCAAGAATCAATGGCTTTCCTCCTGCTACACAGAGAATAGTAATGTCTGATGCTGCTTGGGGTTTATCATTCGGGAAATTTTTGGAGCTCAGTTTCTCAAACCATGCTGCAGCCAGCAGGGTGGCAAGCTGTGGCCATTCTTTACACAGAGATTGTCTTCGCTTTTATGGATTTGGGAGAATGGTTGCTTGTTTTCGATATGCATCAATTGATGTTCACTCTGTCTACCTTCCCCCACCCCAACTGATTTTTGATTATGGGAATCAGGATTGGATACAACAAGAATCAGATGAGGTGGTCAACCGAGCAGAGCTTTTATTCTCTGAGGTTCTCAATGGTCTTAGCCATATTGGAGAGAATAGATCTAGTGCAGTCCAAAGCAATAATGGCCTTAAAACAACTGAATTAAGACGCCAAGTTGCTGAATTGGAGGGGATGTTACAAAAGGAGAAACTAGAATTTGAGGAAACTCTTCAAAAAATTTTGAACCAAGAAAAGAGAAATGGCCAACCGGGGATTGACATTTTGGAAATTAATCGATTATGGAGGCAGCTACTTTTTCAATCATATATGTGGGATCACCGCCTTATTTATGTATCTAACTTAGTCAATTCCAACAATGAAAGTGATTTAGGCAGTCCAATTTCAGAGGATAAGGACTTGGAGAAACCAATCGATGAAAATCAGATGGGCATGGTCCCTATGGCAGGGAGAGAATTCAATAGTGTAAATTCTGTTAATGATGATCCAAAGCTTTATGAAAGCCCAAACCTTGAAGGAGATGGAGTAGTTGATGCAAAAATTACCCAAGAGGATGCATTGCATCAAGAAATTGACATGGCCAAAAGTAAAAATCATGAAAAAGAAGACAATCATATTCTTTCAAACGCCAAAAGCATTAGTGATCCATCTGACCTTTCAGAGCCTGAAGTGGGCGTCCGCAGAGCTCTCTCTGATGGACCATTTCCTATCATACCTAGTTTGTCTGAAACACTTGATGCTAAATGGACTGGTGAAAACCACTCAGGATTTGGAATTCAAAAGGACAACGCTTCTGTCAATCCTGATATGTTTTTGACAGATGCTTTGACGACCACTGTACATAAAGAAACATTCTATCAAGGGGATCGTGCAGATGATCAAAATGGTGCGAAGAGTTTCTATTATCCTTCTAAAGGTCATGATAACGTGGAAGACTCTTCAAGTTGGTTAGGAATGCCCTTCTTAAACTTCTATCGCCAATTTAACAAGAATCTTTTTGCTAGTACACAGAAGCTTGATACTCTAGTTGACTACAATCCTGTTTATATGTCATCCTTCCGGAACCAGGATCTCCAGGGTGAGGCAAGGTTACTTCTGCCAATTGGTGTCAATGACACTGTAATTCCAGTATATGATGATGAACCCTCAAGTATTATAGCTTATGCCTTAATGTCTCCAGAATATCATCTCCAATTGACTGATGAAGGAGAAAGACCAAAAGAAGGAATTGAGTTGAGTTCATCATATTTTTCTGACTCAGGCACCTTCCATTCATTCTTATCTGTTGACGAAACAGCTTTTGATTCTCAGAAAAGTTTTGGATCAATAGAGGAAATGATACTTTCCATGTCTGGGTCTCGTGCCTCATCAATGCTGGACCCAATGTTATATTCAAAGGCTTTGCATGCCAGAGTTTCCTTTGGAGAAGACGGTCCTCTTGGCAAAGTAAAATATTCAGTTACTTGTTACTATGCCAAGCGTTTTGAAGCCTTAAGAAGGGTCTGTTGTCCTTCCGAGCTTGACTATATAAGGTCTCTGAGTCGCTGTAAGAAATGGGGAGCTCAAGGTGGGAAGAGTAATGTGTTCTTTGCAAAAACCTTGGATGATCGATTTATCATCAAACAAGTTACCAAAACAGAGCTTGAATCATTCTTTAAATTTGGTTCTGAATACTTCAAATACCTTTCTGAATCCATAGGCACAGGAAGTCCAACATGCCTGGCAAAGATTCTTGGCATATACCAGGTTACATCAAAGCATCTTAAAGGAGGGAAAGAATCAAGGATGGATGTTTTGGTTATGGAGAATCTTTTGTTTCGGAGGACTGTGACACGACTGTACGATCTTAAAGGGTCTGCCAGATCTCGGTATAATGCAGACAGTAGCGGGAAAAACAAAGTTCTGCTGGACCAGAACTTGATTGAAGCAATGCCAACATCTCCTATTTTTGTAGGAAACAAAGCAAAGAGATTGCTAGAGCGAGCGGTGTGGAACGATACCGGTTTTCTGGCATCAGTTGATGTAATGGACTATTCTTTACTAGTTGGGGTGGATGAAGAGAAGCATGAGTTAGTTATTGGAATCATTGATTTCATGAGGCAATATACTTGGGACAAACATCTTGAAACATGGGTGAAAGCTTCAGGCATCCTTGGAGGACCAAAAAACACATCTCCAACAGTGATATCACCAAAGCAATACAAGAAAAGGTTCAGAAAAGCAATGACCACTTATTTTCTAATGCTTCCAGATCAGTGGTCTCCTCCATCTATGAAACCTAGTAATTCTCAGTCTGATTTAGGTGAAGACAACACACAACCTAGGACTCCCGCTGAATGA 5514 0.4155 MDVVDKTFSDLVGIIKSWIPWRSEPANVSRDFWMPDQSCRVCYECDSQFTLFNRKHHCRLCGRIFCAKCTTNSVPAPFSSQRNSWDELEKIRVCNYCYKQWEQGVVALDNSVQISNLDHSTSESTSSLASSKTSATAISSNITLCSMPYSVGSYKQVQQGSVLNLHQSPVKGKDIDREGLSALGGRNDLVADLGDPLPKQYEFSINRSDDDEDEYGVYQSDSDMRHYPQVNSYYGQAEVDGISNIDGSQKVHPDGENINANLSSNYSFDTQGLEGTPVIAKNEDDPDICDENEAPSSLYVSEDVDTEPVDFENNGLLWLPPEPEDEEDEREAILYDDDDDNDVNASGEWGYLRSSSSFGSGEYRHRDRSSEEQKNVMKNVVDGHFRALVAQLLQVENLTVEENDKNSWLEIVTSLSWDAATLLKPDMSKSGGMDPAGYVKVKCIACGNRFESVVVKGVVCKKNVAHRRMTSKVDKPRLLILGGALEYQRVTNLLSSVDTLLQQEMDHLKMAVAKIAAHQPNILLVEKSVSRYAQEYLLAKDISLVLNVKRPLLERIARCTGTQIVPSIDHLSSQKLGYCETFHVEKFVEDLNSAGQGGKKAMKTLMFFDGCPKPLGFTILLRGADKDELKKVKHVVQYGVFAAYHLALETSFLADEGVSLPELPLNSLALPDNPSSIQRSISTVPGFGVSDNEKPQGHELDTEVQRTKSVMISDLASSAFSTEPDVSNGASQSMPFESSLNLSTAFLSSIVASGNSIPESHHDKLISCTSRDRNEMESKDPLAEETSVVDNTLGVGDDPTVNDPGTLEKLYQCISADTPQNGHSEVPTNQLHGSESFSPKDGQNQPEMLGITIEEQIPMKEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIKYYGSFDKPLGRFLRDHLFDQSYRCDSCDMPSEAHVHCYTHRQGTLTISVKKLPEIILPGERDGKIWMWHRCLRCPRINGFPPATQRIVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGRMVACFRYASIDVHSVYLPPPQLIFDYGNQDWIQQESDEVVNRAELLFSEVLNGLSHIGENRSSAVQSNNGLKTTELRRQVAELEGMLQKEKLEFEETLQKILNQEKRNGQPGIDILEINRLWRQLLFQSYMWDHRLIYVSNLVNSNNESDLGSPISEDKDLEKPIDENQMGMVPMAGREFNSVNSVNDDPKLYESPNLEGDGVVDAKITQEDALHQEIDMAKSKNHEKEDNHILSNAKSISDPSDLSEPEVGVRRALSDGPFPIIPSLSETLDAKWTGENHSGFGIQKDNASVNPDMFLTDALTTTVHKETFYQGDRADDQNGAKSFYYPSKGHDNVEDSSSWLGMPFLNFYRQFNKNLFASTQKLDTLVDYNPVYMSSFRNQDLQGEARLLLPIGVNDTVIPVYDDEPSSIIAYALMSPEYHLQLTDEGERPKEGIELSSSYFSDSGTFHSFLSVDETAFDSQKSFGSIEEMILSMSGSRASSMLDPMLYSKALHARVSFGEDGPLGKVKYSVTCYYAKRFEALRRVCCPSELDYIRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFFKFGSEYFKYLSESIGTGSPTCLAKILGIYQVTSKHLKGGKESRMDVLVMENLLFRRTVTRLYDLKGSARSRYNADSSGKNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTGFLASVDVMDYSLLVGVDEEKHELVIGIIDFMRQYTWDKHLETWVKASGILGGPKNTSPTVISPKQYKKRFRKAMTTYFLMLPDQWSPPSMKPSNSQSDLGEDNTQPRTPAE* 1838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1126 1837 Pfam FYVE zinc finger 33 101 IPR000306 GO:0046872
Apr10g1126 1837 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1580 1746 IPR002498 GO:0016307|GO:0046488
Apr10g1126 1837 CDD FYVE_PIKfyve_Fab1 32 99 - -
Apr10g1126 1837 SUPERFAMILY FYVE/PHD zinc finger 31 103 IPR011011 -
Apr10g1126 1837 CDD PIPKc_PIKfyve 1541 1804 IPR044769 GO:0000285
Apr10g1126 1837 SUPERFAMILY SAICAR synthase-like 1538 1804 - -
Apr10g1126 1837 Coils Coil 1104 1138 - -
Apr10g1126 1837 Pfam TCP-1/cpn60 chaperonin family 392 645 IPR002423 GO:0005524
Apr10g1126 1837 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1480 1804 IPR002498 GO:0016307|GO:0046488
Apr10g1126 1837 SMART PIPK_2 1514 1805 IPR002498 GO:0016307|GO:0046488
Apr10g1126 1837 MobiDBLite consensus disorder prediction 817 844 - -
Apr10g1126 1837 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1B 1 1827 - -
Apr10g1126 1837 SMART fyve_4 28 103 IPR000306 GO:0046872
Apr10g1126 1837 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 102 IPR017455 -
Apr10g1126 1837 MobiDBLite consensus disorder prediction 1811 1837 - -
Apr10g1126 1837 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 24 107 IPR013083 -
Apr10g1126 1837 Gene3D - 1663 1805 - -
Apr10g1126 1837 CDD Fab1_TCP 386 657 - -
Apr10g1126 1837 MobiDBLite consensus disorder prediction 1813 1837 - -
Apr10g1126 1837 SUPERFAMILY GroEL apical domain-like 451 623 IPR027409 -
Apr10g1126 1837 Gene3D GroEL 451 623 IPR027409 -
Apr10g1126 1837 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1504 1661 IPR027484 -
Apr10g1126 1837 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 1 1827 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1126 Apr-Chr10 23548049 23558252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1126 2 1837 EF-hand Containing Proteins AT3G14270 60.236 0.0 2103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1126 K00921 - gmx:100819364 3162.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1126 10 23548049 23558252 Apr10g1126 10 23548049 23558252 ECH