Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1113 ATGGGAAGGGTAACGAGCATTGTTGGATCATGTTGTTTGGCATTGTTATTAGCAATAAACATCTTAAGCAGAAAGTGTGATGCTGAAGATGAATTCAAAGTGGAGAAAGAACAGAAAGGGTTGTTCGTGTTAGGGGATTCACTCTTCGACCCAGGAAACACCCAATATATCAAAAGCAGTCTCACCAAAATTTTTTCCGCAGGTAACCCGCCGTACGGAGAATCATTCTTCAAACATCCCACAGGAAGATTCTCAGATGGCCGTGTTGTCCCTGATTTCATAGCTACTTTTGCAGGTTTACCTCTAATTTCGCCGTATTTGCAGCCACACCCAACTCCGTTTACGGACGGCGCCAACTTCGCTATGGCTGGAGCTGCTGTTACCGATGGTTTAGATCCAAATGTTAATCTTCCAAAACAACTGAGCTATTTCAAGGCATTAGCGAAGTCACTGGAACATGACCTAGGTGAAATAGAAGCCAAGAGAGTTCTGGAAAAATCTGTTTACTTGTTCAGTATTGGAGGCAATGACTACGTTGGTTTTCAAAACCAAAATCCCAATGCTACCAAATCAAGCGGAAGGGAATTCATTGATCAAGTGGTTTACAACCTCACTGATGCGTTCAAGGCTATATATAGTCTTGGAGGTAGAAAAATAGCATATCAAAATGTAGGGCCTTTGGGGTGTGCACCAAGTATCAGGGCTAGGAGTGGAGGTGATTGTAATGAAGAATTATTGGAAATGGCAAGAGAACACAACCAAGCTTTCTCTGAAGTTCTTAAGAAGTTAGAGATAGAGCTATCAGGATTTAAATACTCATTCTTTGATTATTATGTTTCGTTTTACGACATAGTAATCAACCCAGTGAAATGTGGATTTAAGGAGGTTAAGAGAGCATGTTGTGGTGTTGGTCCCTTCAGAGGCAGTGGTTGTGGAACAAAGAAATATGAGTTATGCGATAAGCCATCTGAATATGTATGGTTTGATGGGGAGCATCCAGTGGAAAGGGTAAATCTCCAAATGGCAAACCTTTTATGGAGTGGTCCACCAGAGGTGACTGGGCCTTACAATATGAAGCAGTTATTCCAAATATAA 1095 0.4146 MGRVTSIVGSCCLALLLAINILSRKCDAEDEFKVEKEQKGLFVLGDSLFDPGNTQYIKSSLTKIFSAGNPPYGESFFKHPTGRFSDGRVVPDFIATFAGLPLISPYLQPHPTPFTDGANFAMAGAAVTDGLDPNVNLPKQLSYFKALAKSLEHDLGEIEAKRVLEKSVYLFSIGGNDYVGFQNQNPNATKSSGREFIDQVVYNLTDAFKAIYSLGGRKIAYQNVGPLGCAPSIRARSGGDCNEELLEMAREHNQAFSEVLKKLEIELSGFKYSFFDYYVSFYDIVINPVKCGFKEVKRACCGVGPFRGSGCGTKKYELCDKPSEYVWFDGEHPVERVNLQMANLLWSGPPEVTGPYNMKQLFQI* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1113 364 Coils Coil 246 266 - -
Apr10g1113 364 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 12 363 IPR044552 -
Apr10g1113 364 CDD SGNH_plant_lipase_like 41 349 IPR035669 -
Apr10g1113 364 SUPERFAMILY SGNH hydrolase 40 347 - -
Apr10g1113 364 Gene3D SGNH hydrolase 27 349 IPR036514 -
Apr10g1113 364 PANTHER INACTIVE GDSL ESTERASE/LIPASE-LIKE PROTEIN 25 12 363 - -
Apr10g1113 364 Pfam GDSL-like Lipase/Acylhydrolase 41 344 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1113 Apr-Chr10 23438971 23441249 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1113 40 348 Acyl Lipid Metabolism Gene Families AT4G10950 31.776 9.32e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1113 - - qsu:112004838 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1113 10 23438971 23441249 Apr10g1113 10 23438971 23441249 ECH