Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1110 ATGGAGTTTACAGAGGAGAAACTGCATAGCAGTATTGCTGTTGCAAATGGAGCTGACCCTAAGTCATGCTATATGCAAAAGTTCAGGCTCTATGAGACCCGCTCGAAATTTTACATGATCGGAAGAGACAAAAACAGAACATTTTGGAGGGTCTTAAAGATTGACAGATTGGAGCCATCTGAATTGTATATCGTTGAAGATTCAACAGTATACTCAGAAATTGAGTGTTGTGACCTTCTAAGGCGGATACATGAAGGAAACATTTCAACAGGGGGGCTTAAATTTGTAACGACATGCTATGGAATCATTGGATTTATCAAATTTCTTGAGCCATATTACATGCTGCTTATAACAAAACGAAGGAAGATTGGCACAATCTGTGGGCACACTATATATGCTATCACAAAGAGCGAAATGGTTCCAATTCCACATGCTACTGTGCGAACCAAAATGGCTTATTCTAAGGATGAGAACAGATACAAGAAGCTTCTATGCAGTGTGGACCTTACAAAGGACTTCTTTTTCAGCTACTCCTACAATATCATGCTTAGTCTTCAAAGGAACTTATCTGATGATAATACTACGGGACAATCACTTTATGAAACTCTTTTTGTTTGGAATGAGTTCTTAACCCGTGGAATCAGGAATAGTCTCCAGAATACTTCCTGGACTGTTGCCTTAGTGTATGGCTTCTTTAAACAGGTCAAACTTTCTATTTCTGGCAGCGAGTTCAACTTGACTATCATTGCTAGGCGCTCAAGGCATTATGCTGGGACCAGGTATTTGAAACGAGGAGTGAATGAAAAGGGCAGAGTAGCTAATGATGTTGAGACAGAGCAGATTGTCTTTACTGATGCTCATAATGGATGCCCAATGCAAATCAGTTCTGTGGTGCAGATCCGGGGTTCAATCCCTCTGTTCTGGTCTCAGGAAGCCTCTAGATTGAATATAAAACCTGACATTATATTATCAAGGAAGGACTCTAATTTTGAAGCCACCCGACTTCATTTTGAAAATCTTGTCAAGAGATATGGAAATCCAATTATTATATTGAACTTGATAAAGACACGTGAGAAGAGGCCTCGGGAAACTATTTTGCGAGCTGAATTTGCAAATGCTGTTAGGTCTATTAATAAAAATATTAGAGGGGATAATCGCCTGAGGTTCCTTCATTGGGATCTGCATCGGCATTCACGATGCAAAGCTACTAATGTGTTGGCACAACTGGGAAAAGTGGCTGCATATGCGCTGAAGTTGACTGGCATCTTCTACTGTCCAGTGACACCAAATGTGAAGCTAGATGGATTATTCCAGCATTCCTACACTGAGAATAACAATGTCATTGATCTCTGTATCCCAGAACAAGCTAGTATAAATGAGGATACTATTGATAAGGAAACAGAAGTTAGCAATTGTTACTGTAGTGGTGACGAGAACAAAGATTCCAGTGTCAAGCCACAGATGCTTCAAGCTGGGGTCTTGAGGACTAATTGCATAGACTGTTTGGATCGTACCAATGTTGCTCAATATGCTTATGGACTAGCTGCACTTGGACGTCAGCTCCAAGTTTTAGGATTTATTGAATCCCCATGTATAAATCTTGATAACCCTTTGGCCAAGGAATTAATGGCAGTCTATGAGTCCATGGGCGACACATTAGCCTTTCAATATGGGGGGTCTGCTGCACACAATAAGATATTTTCTGAGAGAAGAGGTCAATGGAAGGCAGCAACACAATCCCAGGAATTTATTCGAACCCTACAGCGTTATTACAACAACACATATTTAGATGGTGATAAGCAAAATGCAATTAACCTATTCTTGGGGCATTTTCAGCCACAACAGGGAAAACCAGCACTGTGGGAGCTAGATTCAGATCAGCATTGCACTGTTGGGAAACGTGGCCTGTATTTAGCCGATGACAGCGTCAGGTCATCTATTAAAAGATCGCTATCAGATGGCAACATTCTCTGTGAAAATGACAATACAATTAGGAACTTGAATGGTACAAATTGTCAGCACTCATCTGAAAAACCCAATAAGCGTTTCCTTTCAGGGTCTACTCCAGACATCTTTACATGCGGAAGTGATATTTGTCATTGCAGGCAGATATATGGAGGAATGGTCAAGGACCAAAATTATGATATTGATCATATTTGTTACGATGAACATGGAGGCATATGTGACTGCTCCAATTTTGTTGATTTGGACTGGCTTTCTTCCTCTGGAAATTCTTGTGAAGAGGAATTACTTGAAAGGTCAACCAGCATCTCCTCAGAAAATATTGCGAATGAACTAATAACTACTGAGACATCTGCTAGTGAATCTGGATCCAGCATGAAGGGAAGGCAGAGTGGAGAAGAATTCAGCAAACACTTTGAAAACTTTGAACGGTGGGTAACTGAAGGGGAATTGCTTTAG 2421 0.4056 MEFTEEKLHSSIAVANGADPKSCYMQKFRLYETRSKFYMIGRDKNRTFWRVLKIDRLEPSELYIVEDSTVYSEIECCDLLRRIHEGNISTGGLKFVTTCYGIIGFIKFLEPYYMLLITKRRKIGTICGHTIYAITKSEMVPIPHATVRTKMAYSKDENRYKKLLCSVDLTKDFFFSYSYNIMLSLQRNLSDDNTTGQSLYETLFVWNEFLTRGIRNSLQNTSWTVALVYGFFKQVKLSISGSEFNLTIIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFTDAHNGCPMQISSVVQIRGSIPLFWSQEASRLNIKPDIILSRKDSNFEATRLHFENLVKRYGNPIIILNLIKTREKRPRETILRAEFANAVRSINKNIRGDNRLRFLHWDLHRHSRCKATNVLAQLGKVAAYALKLTGIFYCPVTPNVKLDGLFQHSYTENNNVIDLCIPEQASINEDTIDKETEVSNCYCSGDENKDSSVKPQMLQAGVLRTNCIDCLDRTNVAQYAYGLAALGRQLQVLGFIESPCINLDNPLAKELMAVYESMGDTLAFQYGGSAAHNKIFSERRGQWKAATQSQEFIRTLQRYYNNTYLDGDKQNAINLFLGHFQPQQGKPALWELDSDQHCTVGKRGLYLADDSVRSSIKRSLSDGNILCENDNTIRNLNGTNCQHSSEKPNKRFLSGSTPDIFTCGSDICHCRQIYGGMVKDQNYDIDHICYDEHGGICDCSNFVDLDWLSSSGNSCEEELLERSTSISSENIANELITTETSASESGSSMKGRQSGEEFSKHFENFERWVTEGELL* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1110 806 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 7 806 IPR043573 GO:0043813|GO:0046856
Apr10g1110 806 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC4 7 806 - -
Apr10g1110 806 MobiDBLite consensus disorder prediction 769 784 - -
Apr10g1110 806 MobiDBLite consensus disorder prediction 769 788 - -
Apr10g1110 806 Pfam SacI homology domain 100 398 IPR002013 GO:0016791
Apr10g1110 806 ProSiteProfiles Sac phosphatase domain profile. 164 559 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1110 Apr-Chr10 23409249 23419267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1110 25 806 Acyl Lipid Metabolism Gene Families AT5G20840 56.250 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1110 K22913 - gmx:100806380 1415.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1110 10 23409249 23419267 Apr10g1110 10 23409249 23419267 ECH