Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1093 ATGGAAGAGGAAATGGCGATGGACACTTCACCCAATCCCAGTTACTTCGATCCCCACAACCTCACCTCCAGACAGCAGTTCCGTAGATATGGGAAGAGGCACTCTACGTCAGGTTCTTCAATCCAACAAGACAACTCGGCTTCCAAGTTAAGTGAAACTGGGTTGTTATATGATGGTCCGAGCATCCATAGTCCTACTAATGCTGCACTTGTTCTTGAAAATATTAAACAAGAGGTTGAGAGTCTAGATGCTGATTACTTGGAAGAGAAAACACCACATTCCTCTAGAAGGAGATTATCTTCTGATATTCATGGAGTTCCTGGCATGGATGCTGGATTTGACTCTGTACGGCACTCATTAAAGGCTTGTAAGCAAGAGGGTGACTCATTGGGAGATGGCGTGGAAACAATCTTTACTTTATTTGCATCTCTGCTTGATTCTTCTTTGCAAGGACTGATGCCTATTCCTGATCTGATATTAAGATTTGAGAATGCATGTCGAAATGTTTCTGAGTCTATAAGGTATGGCTTGAATATAAGGCATCGAGTTGTTGAGGACAAATTGATGAGGCAGAAGGCTCAACTCTTACTTGATGAGGCGGCTACCTGGTCTCTCTTGTGGTTCCTTTATGGGAAAGGAAATATATCTCTAACCATCTATGTGTCAGGAACCTCACATGTTGTGGCTTCTGAGTTTGTTGCAGAGGACCATACAGCTCAATTATGCCTTCGGATAGTCCAGTGGTTAGAAGGTTTAGCTTCTAAAGCACTTGACTTGGAAGCAAAGGTGTGTGGATCTCATGTAGGTAGTTATCTCCCCAGCTGTGGAGTTTGGCATCATACTCAGCGTTACTTAAAGAAAGGAACTTCTGACATGAACCTTGTGCATCACTTGGACTTTGATGCTCCAACCCGTGAAAATGCAAATCTTTTGCCTGATGACAAAAAACAAGATGAATCTCTTCTAGAAGATGTGTGGACTCTTTTAAGGGCTGGAAGGCTAGAAGAGGCATGTGAACTTTGCCGGTCTGCAGGACAGCCATGGAGAGCTGCCTCTCTATGCCCATTTGGAGGTTTGAACCAGTTTCCTTCTGTTGAAGCGCTGGTGAAGAATGGTAAAAATAGAACTTTGCAAGCCGTTGAATTTGAAACTGGTATTGGTCATCAGTGGCATCTTTGGAAATGGGCTTCATATTGTGCATCAGAGAAAATAGCAGAACAGGGTGGGAAATGTGAAGCAGCTGTGTATGCAGCCCAATGCAGCAACCTAAAACGGATGCTTCCACTCTGCACAGACTGGGAGTCAGCTTGCTGGGCAATGGCAAAGTCTTGGCTAGATGTGCAGGTAGACTTGGAAATCACACGTTCACTGCCAGGGGGTGTTGATCAACTTAGAACTTTTGGAGATGTAATTGATGGAAGCCCGGGACGTGCTGATGGTTCATTTGAACATTCTAATGGATCTGAAAATTGGCCCATTCAAGTTTTGAATCAGCAACCACGGCAACTTTCATCTTTTCTTCAAAAACTTCATTCAGGGGAAATGATCCATGAAACTGTTACCCGACAATGCAAGGAGCAACAACGGCAAATTCAGATGACTTTAATGCTAGGGGACATACCACGTGTACTAGACCTTATATGGTCATGGATAGCACCTTCAGAAGATAATCAGAATGTATTTAGGCCTCATGGAGATCCTCAAATGATACGATTTGGTGCACATCTAGTCCTCGTGCTTAGATATTTACTTGCTGAAGAAATGAAGGATGCCTTCAGGGACAAGATTCTGAGTGTCGGTGATCATATTTTGCACTTGTATGCCCTGTTTCTCTTTTCAAAGGAACATGAGGAGTTGGTGGGTATATATGCTTCTCAGCTTGCATGTCACCGTTGCATTGATCTCTTTGTGCACATGATGGAACTTAGGCTGCATAGCAGTGTACATGTCAAATATAAGATATTCCTTTCCGCCATGGAATATTTACCATTTTCATCTATGGATGATGCTAAGGGATGTTTTGAAGACATTATTGAGAGAATTTTGCTGAGATCCCGAGAGATCAAGGTTGGAAAATATGATAACCTGTCAGATGTTGCAGAACAGCACAGACTGCAGAGTCTTCAAAAAGCTAAAGTCATCCAGTGGCTTTGTTTTACACCACCATCAACAATTACTAATGTCAAAGATGTTAGTAAAAAACTTCTTCTCCGAGCATTGGTACATAGCAATATACTCTTCCGGGAGTTTGCTTTGATTTCTATGTGGAGAGTACCAGCAATGCCTATAGGTGCCCACACAGTACTTGGTTTTCTAGCTGAACCCTTGAAACAGCTTACAGAAACTCTTGAGACCTCAGAGGATTATAATGTTTTTGAGGACCTGAGAGAATTCCAAGACTGGCGTGAATATTACTCCTGTGATGCAACCTACCGCAATTGGCTCAAAATTGAATTAGAGAATGCAGAAGTTCCTGTCTCTGAGCTGTCACTTGAAGAAAAGGAAAGGGCCATTTCAGCAGCCAAGGAAACACTGAATGCATCTCTTTCCCTGTTGGAAAGAGAAGAAACACCTTGGTTGGCTTCTACCAATCGTATATATGAATCAGCTGAACCTGTTTTCCTTGAACTTCATGCAACAGCAATGCTCTGCCTGCCATCTGGAGAGTGTTTGTGTCCAGATGCTACTGTTTGTACTACACTGACTAGTGCCTTCTACTCTTCAGCTGGTGATGAGGTTGTGTTAAGTCGACAACTAATGGTCAATGTCTCTATATCTTCAAGGGACAACTATTGCATTGATGTTGTCCTTCGTTGCTTAGCAATAGCTGGTGATGGACTTGAACTACATAATCTCAATGATGGTGGTATTCTTGCCACCATTATGGCTGCTGGTTTTAAAGGTGAGCTTCCTCGGTTTCAAGCTGGAGTTACAATGGAAATATCCCGTTTAGATGCTTGGTATTCTGACAAAAATGGCACCTTAGAGTGCCCGGCAACATACATTGTGAAAGGACTTTGTCGTAGGTGCTGTCTCCCAGAAGTCATTCTTCGTAGCATGCAAGTTTCTGTTTCTCTCATGGGATCTGGAGTCCTGCCTGATTGCCACGATACTTTGATTGAGTTGGTTGGCAGTCCTGAAACTGACTTCCTTCACTTGTTTAGCCAACAACAATTACAGGAGCTTTTGTTGTTCGAGAGGGAATACTCAATCTGCAAAATGGAGCTTACAGAGGAATGA 3240 0.429 MEEEMAMDTSPNPSYFDPHNLTSRQQFRRYGKRHSTSGSSIQQDNSASKLSETGLLYDGPSIHSPTNAALVLENIKQEVESLDADYLEEKTPHSSRRRLSSDIHGVPGMDAGFDSVRHSLKACKQEGDSLGDGVETIFTLFASLLDSSLQGLMPIPDLILRFENACRNVSESIRYGLNIRHRVVEDKLMRQKAQLLLDEAATWSLLWFLYGKGNISLTIYVSGTSHVVASEFVAEDHTAQLCLRIVQWLEGLASKALDLEAKVCGSHVGSYLPSCGVWHHTQRYLKKGTSDMNLVHHLDFDAPTRENANLLPDDKKQDESLLEDVWTLLRAGRLEEACELCRSAGQPWRAASLCPFGGLNQFPSVEALVKNGKNRTLQAVEFETGIGHQWHLWKWASYCASEKIAEQGGKCEAAVYAAQCSNLKRMLPLCTDWESACWAMAKSWLDVQVDLEITRSLPGGVDQLRTFGDVIDGSPGRADGSFEHSNGSENWPIQVLNQQPRQLSSFLQKLHSGEMIHETVTRQCKEQQRQIQMTLMLGDIPRVLDLIWSWIAPSEDNQNVFRPHGDPQMIRFGAHLVLVLRYLLAEEMKDAFRDKILSVGDHILHLYALFLFSKEHEELVGIYASQLACHRCIDLFVHMMELRLHSSVHVKYKIFLSAMEYLPFSSMDDAKGCFEDIIERILLRSREIKVGKYDNLSDVAEQHRLQSLQKAKVIQWLCFTPPSTITNVKDVSKKLLLRALVHSNILFREFALISMWRVPAMPIGAHTVLGFLAEPLKQLTETLETSEDYNVFEDLREFQDWREYYSCDATYRNWLKIELENAEVPVSELSLEEKERAISAAKETLNASLSLLEREETPWLASTNRIYESAEPVFLELHATAMLCLPSGECLCPDATVCTTLTSAFYSSAGDEVVLSRQLMVNVSISSRDNYCIDVVLRCLAIAGDGLELHNLNDGGILATIMAAGFKGELPRFQAGVTMEISRLDAWYSDKNGTLECPATYIVKGLCRRCCLPEVILRSMQVSVSLMGSGVLPDCHDTLIELVGSPETDFLHLFSQQQLQELLLFEREYSICKMELTEE* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1093 1079 MobiDBLite consensus disorder prediction 32 47 - -
Apr10g1093 1079 Gene3D - 278 427 - -
Apr10g1093 1079 PANTHER NUCLEAR PORE COMPLEX PROTEIN 4 1078 - -
Apr10g1093 1079 MobiDBLite consensus disorder prediction 1 47 - -
Apr10g1093 1079 Pfam Nuclear pore protein 84 / 107 196 865 IPR007252 GO:0005643|GO:0017056
Apr10g1093 1079 Gene3D - 699 892 - -
Apr10g1093 1079 ProSitePatterns Zinc finger C2H2 type domain signature. 629 649 IPR013087 -
Apr10g1093 1079 PANTHER NUP107-RELATED 4 1078 IPR007252 GO:0005643|GO:0017056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1093 K14301 - gmx:100786552 1996.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1093 10 23292445 23309425 Apr10g1093 10 23292445 23309425 ECH