Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1085 ATGTGTGGGATGTGGATTCTCGCGTTTCTGTTGCTGTTTTCTCTCTGCACCGAAGCTTCGGTTCACGATTACAGGGGTGAGAAATTCTCTGCCAAAGGTAACGCCTTTGTCGTTCATGGGGGCAGCGAAGGAATTTACTCTTCTGCCCCTAATCTCAACGACACTGCTACTGATGCCGACTCTTACATACGGTTTGAGAGGGTCACATTTCGTAGAAACAAGGAATTTTCTAACTTCAGCTCATGGCCGATTCAAGCTGTTGTTTTTGAAGTTGAAGATAGAGAGACAATTGGTGGTTCAGCCTATGGGGGTCAGAGGGCTGTCTGTTGCACTAGTGATCTAGCAAAACTTGGTGTGTGCAAAGAAGGACAGGTCATTCACCGCCCTTCTGCAGAGAATTCGGATTGGCCTCAAGTTTTTGGTGTCTCTTTTGACATGGATGACGAAATGGCGGTGCTGCCATTGAAATCTATAGAAATCACAAAAACTGGAATGTATAACTTGTATTTCATCCATTGTGATACGAGACTTAAGGAATTGGTTGTGGAGGGGAAAACTGTATGGAAAAATCCCTCTGGTTATCTGCCAGGTAGGATGGCACCTATGAAAATCTTCTACCAATTCATGTCTTTTGCGTATGTATTGCTTGGAATCTTTTGGTTCTCTCAATATGCTAGATTTTGGAGGGAAGTATTTCCACTGCAGAACTGCGTTACCCTAGTGATAACTCTGGGGATGTTTGAAATGGCTCTGTGGTACTTTGACTATGCTGAATTCAGTGAGATTGGAATCAGGCCAACTGGGACCACCATATGGGCAGTCACCTTTGGGACTGTTAAGCGGACAGTGGCACGTTTGATTATTTTGATGGTTTCAATGGGCTATGGTGTTGTCAGACCTACCCTTGGTGGGCTCACATCAAAGGTGATTATGCTTGGAGGAACCTTCTTTCTTGCATCTGAAGTTCTTGAATTGGTAGAAAATGTTGGTGCAGTAAGTGATCTTTCTGGAAAGGCAAAATTGTTTTTGGTTCTTCCAGCTGCAGTATTGGATGTGTTCTTCATTCTTTGGATTTTCACTTCACTATCTGCAACTTTAAATAAGCTTCAGGCCAGAAGGATGATGATAAAATTGGATATTTATAGGAAATTCACTAATGCTTTAGCAGTAGCTGTGATCGTATCTGTGGGCTGGATATGTTATGAGCTTTACTTCAAATCAAATGATATATATAATGAGCAGTGGCAGAATGCTTGGATCATCCCCGCCTTTTGGCAAGTTCTGTCTTACTCTCTCCTTTGTGTTATCTGTGTTCTTTGGGCTCCATCTCAAAATTCAACACGATATGCTTACCGTGATGATGGGAGCGACGAGTTTGATAGGGATGAGACTACTTTAACACTCATAAAACCATCACCTATTTCTTCAAAGGATGTTCGAAATATGGCAGATGCTAGACCAGTGCAAAGCAGCAACGGAAATTCAAATGATGATTTAGAAGAAGACAAGATAGAATAA 1518 0.4216 MCGMWILAFLLLFSLCTEASVHDYRGEKFSAKGNAFVVHGGSEGIYSSAPNLNDTATDADSYIRFERVTFRRNKEFSNFSSWPIQAVVFEVEDRETIGGSAYGGQRAVCCTSDLAKLGVCKEGQVIHRPSAENSDWPQVFGVSFDMDDEMAVLPLKSIEITKTGMYNLYFIHCDTRLKELVVEGKTVWKNPSGYLPGRMAPMKIFYQFMSFAYVLLGIFWFSQYARFWREVFPLQNCVTLVITLGMFEMALWYFDYAEFSEIGIRPTGTTIWAVTFGTVKRTVARLIILMVSMGYGVVRPTLGGLTSKVIMLGGTFFLASEVLELVENVGAVSDLSGKAKLFLVLPAAVLDVFFILWIFTSLSATLNKLQARRMMIKLDIYRKFTNALAVAVIVSVGWICYELYFKSNDIYNEQWQNAWIIPAFWQVLSYSLLCVICVLWAPSQNSTRYAYRDDGSDEFDRDETTLTLIKPSPISSKDVRNMADARPVQSSNGNSNDDLEEDKIE* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1085 505 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 8 505 IPR009637 GO:0016021
Apr10g1085 505 MobiDBLite consensus disorder prediction 471 505 - -
Apr10g1085 505 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR FAMILY PROTEIN 8 505 - -
Apr10g1085 505 Pfam Lung seven transmembrane receptor 160 446 IPR009637 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1085 Apr-Chr10 23218973 23222732 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1085 - - gmx:100806912 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1085 10 23218973 23222732 Apr10g1085 10 23218973 23222732 ECH