Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1082 ATGAGGGCTTTTGTTGGATTCATCAGAATACTTGTCATTCTACTTTTCCTCTTTGCTTGCTGTTCTTCTACTCATGGAAGTACAAAAACGGAGAGAACTTTAGCGATTATAAAACCAGATGGATTGCTTGGTAACTACACAGATGATATCAAGAGAATAATTTTAGAATATGGTTTCAGCATTTTTGAGGAAAAGATTGTTCAACTTGATGTGGACACTGTGAAAAGATTTTATGCAGAGCACTCTTCAAAAAGCTTCTTTTCCAGCCTTATAAAATATATGACAAGTGGACCAGTGTTAGCTATGGTTTTGGAGAAGGATAATGCTATTGCTGACTGGCGTGCATTAATGGGCCCTACTGATGCAAGCACGGCTAAGATTACTCACCCTCACAGTGAACTAGCTATTCTTTTGTACAGCATCAGAGCAAAATGTGGATTGGATATGGAAAAGAATTGTGTGCATGGATCAGACTCTCCCAAATCTGCTCAAAGAGAGATATCATTTTTCTTCAAAGAGCACTCTGCAGATTTAATTGCAGAACATGATGAATTGTAG 558 0.3781 MRAFVGFIRILVILLFLFACCSSTHGSTKTERTLAIIKPDGLLGNYTDDIKRIILEYGFSIFEEKIVQLDVDTVKRFYAEHSSKSFFSSLIKYMTSGPVLAMVLEKDNAIADWRALMGPTDASTAKITHPHSELAILLYSIRAKCGLDMEKNCVHGSDSPKSAQREISFFFKEHSADLIAEHDEL* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1082 185 Gene3D - 24 183 IPR036850 -
Apr10g1082 185 PRINTS Nucleoside diphosphate kinase signature 33 55 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Apr10g1082 185 PRINTS Nucleoside diphosphate kinase signature 77 96 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Apr10g1082 185 PRINTS Nucleoside diphosphate kinase signature 97 114 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Apr10g1082 185 SUPERFAMILY Nucleoside diphosphate kinase, NDK 29 174 IPR036850 -
Apr10g1082 185 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 12 184 - -
Apr10g1082 185 ProSitePatterns Nucleoside diphosphate kinases active site. 152 160 IPR023005 -
Apr10g1082 185 Pfam Nucleoside diphosphate kinase 31 174 IPR034907 -
Apr10g1082 185 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 12 184 - -
Apr10g1082 185 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Apr10g1082 185 SMART ndk_5 30 177 IPR034907 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1082 K20790 - gmx:100500470 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1082 10 23198915 23202256 Apr10g1082 10 23198915 23202256 ECH