Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1080 ATGGCAACTGCAACCATGGCTACTGCAGCAGGTGCAGCTGCTCTTTTGTACTACACGTTGAATCGGAAATTGCAGTCTCACGATGGAATCAATGACGATGTTGAAGAAAATGGCAGTGATCCACCCGTCGATGCGCCAATAGGTATTGACCGTGTTTCTCATCGGTTAATCCAAGCCCCTGCTACGTGGTTGGAGACAATTTCAACATTGTCAGAGACTCTCAGGTTCACGTATTCAGAGACACTTGGGAAATGGCCCATTGGGGATTTGGCATTTGGTATCAACTTTCTTCTAAAGAGGCAGGGAAACTATCATGTTGACAGTGTGTTTTGTGACAAGGACAGTGTACAGCTCAAAGGGTCTGAGATTACTACTGAACTTAAGTATCTCTTAAACTTGTTGACACTGTGCTGGCATTTTTCAAAGAAGCCCTTTCCCTTGTTTCTAGAAGAAACTGGCTATGCTGAAGAAAATGTCCTCCTTCGGGAACCCAAAGCAGGAATTTTGAAACCAGCGTTTACAATTATAGCTGATCACAAGATGAGGTGTTTTTTGTTATTGATTCGGGGCACACATAGTATCAAGGATACTCTAACAGCTGTTACAGGAAATGTGGTACCATTTCATCACACTGTTGTTCATCAGGGGGGTGTCAGTGATTTGGTTTTAGGTTATGCACATTGTGGAATGGTTGCTGCTGCTCGATGGATTGCAAAGCTTGCAACTCCTTGTCTACTTGAAGCACTTGGCCGCTACCCTGACTATAAAGTTAAGATTGTAGGGCACTCTTTGGGTGGAGGCACTGCAGCAATTCTAACCTATGTGTTGAGAGAGCGAAAGGAACTGTCTGTGACTACATGTGTTACATTTGCTCCAGCTGCTTGTATGACATGGGAGTTGGCAGAGTCAGGCGATAGTTTTATTACTTCTATAATAAATGGAGCTGATTTGGTGCCTACATTTTCAGCTGCTTCTGTAGATGACTTGCGTTCTGAGGTGACAGCATCAGCATGGATTAATGACTTGAGGAATCAAATTGAGCAAACAAGAATACTCAGTACCGTCTATCGTTCTGCTTCAGCATTGGGTTCTCGCCTCCCATCTATTGCCACTGCTAGATCAAAAGTTGCTGGGGCTGGGGCAATTTTGCAGCCAGTTTCTAATGGTACCCAGGTTGTGATGAAGAGGGCCAAGAGTATGGCTCAGGCTGCATGGACCCGTCCAACACTTAATCTGTCCTCTTGGTCATGCATGGGACCCCGTCGCCGACCCATGGCTGATCATTCAAACTCCAAAGACGAGGGGAGTTCCTCTGCATCTCCAGCCTCTACCAATGTTGAAAGTTCTGAACCACTTCTTGGTTCTCCTAGGAAAGGGATTAATGCAAAGAACATGAACCTTCCCGTGTCTTCATCTTTAGAAGAGTGGTCTTCTGAGATTGAATGTGGCAATGAAAGTACTCCTGATGCTGTGGTGGATGTTGATCACGATCAAAGTGAGAATATCATGGAGCATGACAGATATGAGGATCAGATGAGTGAAGTGGAGTTGTGGCAACAACTGGAGCATGAGCTGTATGACAGATCTGAAGGTGAGGAGGAGGCTGATGTGGTAAAGGAGATAAGAGAAGAGGAAGCAGCCATAGCAGAGGAAGTGGGGCAAAGCCAGAGCTCTGTACCGGAAACGAAAGAAGTCCACAGATTTTTTCCACCAGGAAAGATAATGCACATTGTTACTCTCCACTCTGATGCTGCTGAGCATGAAAGTGATGGCAGCCCAACCTCTACAAGTTCGGACAACAGCCAATCAAGTGAGACTAAAATTGGGATTTTTCTTACTTCAAGGTATCTATATAGTAAACTTAGACTTTCACAGAGCATGATCAGTGATCACTTCATGCCAGTCTATAGAAGGCAGATTGAAAGGCTAATAAAAGAACTTGAGGCAGAATCTACTGATGATCATAGAACGCACGAGTTGGTGTTATAG 1989 0.447 MATATMATAAGAAALLYYTLNRKLQSHDGINDDVEENGSDPPVDAPIGIDRVSHRLIQAPATWLETISTLSETLRFTYSETLGKWPIGDLAFGINFLLKRQGNYHVDSVFCDKDSVQLKGSEITTELKYLLNLLTLCWHFSKKPFPLFLEETGYAEENVLLREPKAGILKPAFTIIADHKMRCFLLLIRGTHSIKDTLTAVTGNVVPFHHTVVHQGGVSDLVLGYAHCGMVAAARWIAKLATPCLLEALGRYPDYKVKIVGHSLGGGTAAILTYVLRERKELSVTTCVTFAPAACMTWELAESGDSFITSIINGADLVPTFSAASVDDLRSEVTASAWINDLRNQIEQTRILSTVYRSASALGSRLPSIATARSKVAGAGAILQPVSNGTQVVMKRAKSMAQAAWTRPTLNLSSWSCMGPRRRPMADHSNSKDEGSSSASPASTNVESSEPLLGSPRKGINAKNMNLPVSSSLEEWSSEIECGNESTPDAVVDVDHDQSENIMEHDRYEDQMSEVELWQQLEHELYDRSEGEEEADVVKEIREEEAAIAEEVGQSQSSVPETKEVHRFFPPGKIMHIVTLHSDAAEHESDGSPTSTSSDNSQSSETKIGIFLTSRYLYSKLRLSQSMISDHFMPVYRRQIERLIKELEAESTDDHRTHELVL* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1080 662 MobiDBLite consensus disorder prediction 589 604 - -
Apr10g1080 662 MobiDBLite consensus disorder prediction 431 451 - -
Apr10g1080 662 Pfam Lipase 3 N-terminal region 51 130 IPR005592 GO:0016042
Apr10g1080 662 Pfam Lipase (class 3) 186 323 IPR002921 GO:0006629
Apr10g1080 662 MobiDBLite consensus disorder prediction 584 604 - -
Apr10g1080 662 MobiDBLite consensus disorder prediction 415 463 - -
Apr10g1080 662 Gene3D alpha/beta hydrolase 154 359 IPR029058 -
Apr10g1080 662 CDD Lipase_3 178 322 - -
Apr10g1080 662 SUPERFAMILY alpha/beta-Hydrolases 142 323 IPR029058 -
Apr10g1080 662 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 1 651 - -
Apr10g1080 662 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 1 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1080 Apr-Chr10 23173765 23179115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1080 15 650 Acyl Lipid Metabolism Gene Families AT3G14075 66.304 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1080 - - gmx:100807086 1107.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1080 10 23173765 23179115 Apr10g1080 10 23173765 23179115 ECH