Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1064 ATGCTTCTTCACACTGTTTTCCTCTTTTTTCTTCTCTTATCCACTTCCCATGCTGCTGTCCAAGACTTCTGTGTAGCAGATCTCAAGGGTGCAGAAGGCCCTGCAGGCTTTCCTTGCAAGGCACCTATCAATGTAACTTCGGATGACTTTGTGTTTGACTTATCTGAATCTGGAAACATCTCAAACATAATCAATGCTGCTGTAACACCAGCATTTGTTGCTCAATTCCCAGGTGTTAATGGTCTTGACCTCTCAGCAGCAAGGTTAGACCTTGGTCTTGATGGTGTCATCCCACTGCATACACATCCTGGTGCCAGTGAACTACTTCTAGTGACTCAAGGCCATATCACTGCTGGGTTTATATCATCAGCTAACACAGTTTATCAGAAGACACTGAAGAAGGGAGATATTATGGTATTCCCACAAGGCTTGTTGCATTTCCAAATAGCTGCTGGTAAGAGAAAGGCCCTTGCTTTTGCTATTTTCAGTAGTGCAAACCCTGGCCTTCAAATCCTTGATTTTGCACTGTTTGCCAGCAACTTCTCTACTCCTTTAGTGACTAAGACAACTTTCCTTGATCCTGCTATAGTAAAGAAGCTTAAGGGTGCTCTTGGGGGCAGTGGCTAG 627 0.4418 MLLHTVFLFFLLLSTSHAAVQDFCVADLKGAEGPAGFPCKAPINVTSDDFVFDLSESGNISNIINAAVTPAFVAQFPGVNGLDLSAARLDLGLDGVIPLHTHPGASELLLVTQGHITAGFISSANTVYQKTLKKGDIMVFPQGLLHFQIAAGKRKALAFAIFSSANPGLQILDFALFASNFSTPLVTKTTFLDPAIVKKLKGALGGSG* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1064 208 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 7 204 - -
Apr10g1064 208 CDD cupin_OxOx 16 204 - -
Apr10g1064 208 Gene3D Jelly Rolls 16 207 IPR014710 -
Apr10g1064 208 PRINTS Germin signature 100 120 IPR001929 GO:0030145
Apr10g1064 208 PRINTS Germin signature 130 150 IPR001929 GO:0030145
Apr10g1064 208 PRINTS Germin signature 163 178 IPR001929 GO:0030145
Apr10g1064 208 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 7 204 - -
Apr10g1064 208 Pfam Cupin 54 195 IPR006045 -
Apr10g1064 208 ProSitePatterns Germin family signature. 95 108 IPR019780 GO:0030145
Apr10g1064 208 SMART Cupin_1_3 52 198 IPR006045 -
Apr10g1064 208 SUPERFAMILY RmlC-like cupins 20 205 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1064 Apr-Chr10 23034075 23035064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1064 2 208 Miscellaneous Gene Families AT1G72610 67.788 5.49e-91 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1064 - - gmx:100500326 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1064 10 23034075 23035064 Apr10g1064 10 23034075 23035064 ECH