Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1060 ATGTCTGCTGAATCGCCAAGTTCTGTTCGTAAAGTGGTTGTTCATCTCAGAGCCACTGGCGATGCTCCTATTCTCAAGCAATCCAAATTCAAGATAGCAGGAACTGATAAATTTGCTAAAGTAATTGACTTTCTTCGCCGGCAGCTCCACAGGGAGACACTGTTTGTATATGTCAATAGTGCCTTTTCACCGAACCCTGATGAATTGGTCATTGATTTGTATAATAATTTTGGTTTTGATGGCAAACTGGTGGTCAACTACGCGTGTTCCATGGCATGGGGCTAA 285 0.4281 MSAESPSSVRKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRETLFVYVNSAFSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1060 94 PANTHER AUTOPHAGY PROTEIN 12 1 94 IPR007242 GO:0000045|GO:0005737
Apr10g1060 94 CDD Ubl_ATG12 11 93 - -
Apr10g1060 94 SUPERFAMILY Ubiquitin-like 10 93 IPR029071 -
Apr10g1060 94 Pfam Ubiquitin-like autophagy protein Apg12 11 94 IPR007242 GO:0000045|GO:0005737
Apr10g1060 94 PANTHER UBIQUITIN-LIKE PROTEIN ATG12B 1 94 - -
Apr10g1060 94 Gene3D - 5 94 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1060 K08336 - gmx:100527733 186.422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1060 10 22998077 23000909 Apr10g1060 10 22998077 23000909 ECH