Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1057 ATGGTGATTGGATTGAGAGGTTTTTGTCTCTTTGCAATCGCCTTTCTACTTGTTTTGGAAGAGAGGGTGTCAAAACCCGCTTGCCAACTGGTTCCGAGCAGCAATGAACATGAAGATGTTGATTATGACTTGAAGGTGATGATGGTCGCTGACCTTCTTCTATTGGGCTCCGAATCTGGTCTTGTCAATCACTTCTTCAGAGACTACTACATGTCCAAGTTCTTTCGGAAATCTTTTGAGAGTTTGAGGCCTGATTTGCTTCTTGTATTGGGAGATGTTTCTGCAAAAGGGTCGGAGTTGACAAAGAGCAAATGGATGTCAGTGCTGCGTCAGTTTTACCAAGTGTTGGGCCCCTTTGTTGGTCTTCCATTCCATGCAGTTCTTGGTGATAGGGATATTGGAGAATGCAGTGATCTTGATATGAACAAAGTCGATTGGATTGCTCACAAATTACCAGGATTGGATCCTTCTGGCTGTGCTGCATTTGAGATTGGTAACATCAGTTTTGTCACACTGAATGCTGTAGCTTTGCTTTGTGGCAATAGTAGTTTGCGTTTTGATGTTGAGAAAGTAATAGAGAGGGAAAGTCTAGAACTTCGTATGGAAGCAGAGAGTGCATCCAAAACAATTAATGATTCCCCCAACTTTAGAGATGCAGACTATAACTTCTTCTGGAGGGAGAGCAGCATGTTATCTGGATCAGGCCCTGTACTTCTGCTTCACTTACCTTTGGACCAAACAAGAAATGAGCACCATGGTGACATTGATGCTTTTAAGAGATCTTCAACTTCTTTTATAGAGGGGTTAAATGTGGTGCCAAAAAGCAGGGAGCTCATTGGGGGTGGCCTGTATAAGTTACTTCATACCCTCCCACTAAATGCTTCTGAATACATTTTACAAGCTCTGAAGCCAAGGATTATTTTTAGTGCTCACAGGTATGCATTTTCTGATTACGTTCATTGGGACAGAACTTATGAGATTACTGTTCCAGCAATGTCATGGAATGCAAGAGATGACCCGGGATTTGTGATTGCCACATTCCAAAAGACAGGAAGAGCAGATAGCAAGGAAGAGAGAGAGAGAGAGATGACCGTGGGGAAAGCTGTGTTCCGCATTATTTTTCTTCATGATTATCGTTGTCTACCAATTTTGAAGTCCAAGACGAGAAGTTTTGCTAAATCAATGGCGGAAACTGGAACTGGATCCTCACCCTCCCCCAAACCCCCAACAATGGACCCGCAAAACCCCTCTTCTTCAAACCCTACAATCCAATCCCCTTCTTCAATCTCCCAACAACAATCCCCTTCTATGCCTCCTCTTCCCCAATCTCAACAAGATCAACTCCTTCACCAACAACTCAGTCCTTCAATGCAGCAACCCCAACAACAACAACAACAACAACAACAACAGCAACAATCGCAAACCCTCCTAATTCAGCAACAACAGTCACAATCCATGCCCATCAACATCAACCCTATTTCCAATTTTCAACTCCAACAAACCCTTCAGCGTTCTCCTTCCATGTCACGTCTCAACCAAATTCAGTCTCAGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGTTCAGCGTCATGCGCCAGCAGCCTGGCCTTTACGCCGGCCAGATGAACTTCGGCGCTGCGGCGGCGCAGAATCAGCAGCAGCAACAGCAATTGGGTGCTTCCAATTTGTCGCGGTCCGCGTTGATTGGGCAGAGCGGGCATTTTCCTATGTTGTCTGGTGCTGGAGCACAGTTTAATCTGTTGTCTTCGCCAAGGCAGAAAAGTGGGTTAGTCCAGTCATCTCAATTCACTTCAGGTAATTCTCCTGGACAAGCACTGCAAGGAATGCAAGCAATGGGGATGATGGGGTCACCAAATCTTAGCTCGCAACTACGAGCCAATGGAGCCATGGCTTATGCACAGCAGCTGCGGATGAGTCAGGGTCATCAAATCAGGCAGCAACTATCACAACAGAGTTCGCTAAACACTACACAGGTTCAAGGTATACCAAGGTCATCATCCCTTGCTTTTATGAATTCCCAGTTGTCTGGATTGTCTCAGAATGGACAATCTGCAATGATTCATAACTCTTTAACCCAGCAACAGTGGCTTAAGCAAATGCCAGCAATGTCTGGCCCTGCCTCACCATTGCGTCTTCAACAACATCAGAGGCAGCAGCAGCTGGCTTCTTCTAGTCAACTGCAACAGAACTCTATGACCCTGAACCAACAACAATTGTCCCAGCTGATGCAGCAGCAAAAATCAATGGGGCAGCCTCAGCTGCATCAGCAACAGCAACAACAGCAGCAGCCTCAGCAGCAGCAGCAGCAACAACAACAACTTATACAGCAACAGCCACAACAACAATCTCAACTACAAGCATCAGTTCATCAACAGCAACAGCAGCAGTCTCCGAGAATGCCAGGACCCACAGGCCAGAAGTCACTTAGTCTTACAGGATCACAACCAGATGCTACTGCATCTGGTGCAACTACACCAGGTGGTAGTTCTAGCCAAGGAACTGAAGCTACAAATCAAGTCCTTGGGAAGAGAAAGATACAGGATTTAGTTGCACAGGTGGATCCACAGGGTAGGCTAGACCCTGATGTTATTGATCTTCTTTTAGAGCTTGCTGATGACTTCATTGATTCTGCCACTACACATGGTTGCATTTTGGCAAAACATAGAAAATCATCAACTTTGGAGTCCAAGGATTTATTGCTACACCTTGAGAAAAATTGGGACTTAACAATTCCAGGATATTCAAGTGAAGAGAAGAAGTATCAAAGCAAACCTCAGTTAAATGATCTCCACAAGAGGCGCCTAGATATGATTCGCACATTGATGGAATCCTCACCTGCTGAGTCAAGTATTAACAGCTCTAAAGAGATTAGTAGACAGGGCCTTCCTAATCCTAACCCTGTGGGTGTCCACCACCTCGTAAGACCCTTGAGTTCCGAGCAGCTGGTCTCTCATTCAACCGGTTCTCAAATGCTACAGCAGATCACAAGGTTTTAA 3027 0.4552 MVIGLRGFCLFAIAFLLVLEERVSKPACQLVPSSNEHEDVDYDLKVMMVADLLLLGSESGLVNHFFRDYYMSKFFRKSFESLRPDLLLVLGDVSAKGSELTKSKWMSVLRQFYQVLGPFVGLPFHAVLGDRDIGECSDLDMNKVDWIAHKLPGLDPSGCAAFEIGNISFVTLNAVALLCGNSSLRFDVEKVIERESLELRMEAESASKTINDSPNFRDADYNFFWRESSMLSGSGPVLLLHLPLDQTRNEHHGDIDAFKRSSTSFIEGLNVVPKSRELIGGGLYKLLHTLPLNASEYILQALKPRIIFSAHRYAFSDYVHWDRTYEITVPAMSWNARDDPGFVIATFQKTGRADSKEEREREMTVGKAVFRIIFLHDYRCLPILKSKTRSFAKSMAETGTGSSPSPKPPTMDPQNPSSSNPTIQSPSSISQQQSPSMPPLPQSQQDQLLHQQLSPSMQQPQQQQQQQQQQQQSQTLLIQQQQSQSMPININPISNFQLQQTLQRSPSMSRLNQIQSQQQQQQQQQQQQQQFSVMRQQPGLYAGQMNFGAAAAQNQQQQQQLGASNLSRSALIGQSGHFPMLSGAGAQFNLLSSPRQKSGLVQSSQFTSGNSPGQALQGMQAMGMMGSPNLSSQLRANGAMAYAQQLRMSQGHQIRQQLSQQSSLNTTQVQGIPRSSSLAFMNSQLSGLSQNGQSAMIHNSLTQQQWLKQMPAMSGPASPLRLQQHQRQQQLASSSQLQQNSMTLNQQQLSQLMQQQKSMGQPQLHQQQQQQQQPQQQQQQQQQLIQQQPQQQSQLQASVHQQQQQQSPRMPGPTGQKSLSLTGSQPDATASGATTPGGSSSQGTEATNQVLGKRKIQDLVAQVDPQGRLDPDVIDLLLELADDFIDSATTHGCILAKHRKSSTLESKDLLLHLEKNWDLTIPGYSSEEKKYQSKPQLNDLHKRRLDMIRTLMESSPAESSINSSKEISRQGLPNPNPVGVHHLVRPLSSEQLVSHSTGSQMLQQITRF* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1057 1008 MobiDBLite consensus disorder prediction 719 772 - -
Apr10g1057 1008 MobiDBLite consensus disorder prediction 502 533 - -
Apr10g1057 1008 MobiDBLite consensus disorder prediction 392 468 - -
Apr10g1057 1008 CDD TAF12 851 919 IPR003228 GO:0005669|GO:0006352
Apr10g1057 1008 Pfam Transcription initiation factor TFIID subunit A 852 919 IPR003228 GO:0005669|GO:0006352
Apr10g1057 1008 MobiDBLite consensus disorder prediction 416 468 - -
Apr10g1057 1008 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 776 1007 IPR037794 GO:0000124|GO:0005669|GO:0046695
Apr10g1057 1008 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 393 783 IPR037794 GO:0000124|GO:0005669|GO:0046695
Apr10g1057 1008 SUPERFAMILY Histone-fold 849 920 IPR009072 GO:0046982
Apr10g1057 1008 Gene3D Histone, subunit A 846 921 IPR009072 GO:0046982
Apr10g1057 1008 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 776 1007 - -
Apr10g1057 1008 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 393 783 - -
Apr10g1057 1008 MobiDBLite consensus disorder prediction 711 772 - -
Apr10g1057 1008 MobiDBLite consensus disorder prediction 954 981 - -
Apr10g1057 1008 SUPERFAMILY Metallo-dependent phosphatases 44 350 IPR029052 -
Apr10g1057 1008 MobiDBLite consensus disorder prediction 791 850 - -
Apr10g1057 1008 MobiDBLite consensus disorder prediction 954 971 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1057 Apr-Chr10 22960308 22978932 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1057 - - gmx:100783017 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1057 10 22960308 22978932 Apr10g1057 10 22960308 22978932 ECH