Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1056 ATGGGTTCTCGAGGAAGGCCATTATTTGATCTCAATGAGCCACCTGCTGAGGATAATGATGAGAGAGATGGGTCAACTGCTGCCCAAGGAATAATAAACAATCATGCTTTTTCGCATGCCTCATCTGTCTCTGGATTTCAACCTTTTGTTCGGCCTAAATCCACTAGTGTCCCTGACACAGATACTGAATTGAAGAGAGTGGGAGATCAGGATACAAAGGATTCCTCTAAGTCAAGTAAAGATGAAGATGCAAAAGTGATGGATTCACGGGTACTAAGTTCGGCCAATGCCCAATCTACTGAGAGGGAAGAAGGGGAATGGTCTGACGAGGAGGGCTTTGCTGATGTGAATGGAGGTAAGAATTTGCTACAACAAATTCAAGCTTCAGAAGAGCAAGCAACATCTGGAACGGTGGATGGGGGTGTTGCAGTGGCTTCTGACAGTAAGTCTAGCAATATTAAGAGTTCTAATAGTATAAATCATGAAAAGAGTAGCCATGCTTCTATAGGTCTAGAATCAAATTCTAGTGAACAGAAAAGCAATAGTATCCCAAATTCAGAAAGCAATGTGAAAAATGAAGCTTCTATTGATGCACAGGAGGAACCCACTTTAATTCCCAAGCAAAAAGAAGTGAAAGGAATTGAAGCAAGTCATGCACTTAGGTGTGCAAATAATCCTGGGAAAAGGAAGATTGACCAACGTAAAGAGGAAATGTTGGGAAAGAAACGTAATAGACAGACCATGTTTCTGAATTTGGAAGATGTCAAGCAAGCAGGTCCTATTAAAACCTCAACCCCTAGAAGGCAGACTTTCTCATCCCCTGTCATAAGTCGAACTATAAAGGAAGTTCGCACTATTCCTGCACAAGTTGAGCGTGTTGGATTACCTAAGGATCAGAAACATGTTGATCCATCTTATGGGGAAGGTGGAAACCAAGGTGAAGCACATGAGCCTAAATCTGATTGTAATGGTGATACTTCTGGACTACTACATGTTAGGGCTAGAAGACAAAACAGTGAAACAGAACCTCCTACAGAGGCCAATTTACCACTCATTCCAAGACAGGGTTCATGGAAACAACTGACAGAATCAAGGCAGCAGAAGAGTGTACTTGTTTCTAATAGGAAGTTAGGACCGAGTGGTCTAAGCTCCAATGATGTCAAGTTGGGAAGCAAAAAACAACTTTCTATCAAGAAGCAGGCTCCTGTCAGCAGTCAGTCCCAGGACACATCTGTTGAACGCCTTATAAGGGAGGTGACCAGTGAAAAGTTTTGGCATCACCCAGAGGAGACTGAGCTACAATGTGTTCCTGGACGGTTTGAATCACTGGAAGAGTATGTTAGAGTATTTGAGCCTTTGCTTTTTGAAGAATGCCGGGCTCAACTTTACAGTACCTGGGAAGAATCAACAGAAACAGTGTCAAGAGATACTCATATTATGGTGCGAGTGAAGGCAAATGAGTCAAGAGAAAGAGGTTGGTATGATGTGAAAGTCCTTCCAGTACACGAATTCAAATGGTCATTTAAGGAGGGTGATGTTGCAATCCTTTCGTCCCCTAGGCCTGGATCAGTCAGATCCAAGCAGAACAGTTCATCTTTAAGTCAGGATGATGGGGAATCAGAAATCACTGGTCGAGTGGTCGGTACAGTTAGGCGTCACTCACCTATTGATACTCGAGATCCTCCTGGTGCAATTCTCCATTACTATGTTGGAGACTCTTATGATTCCAGCAGGGTTGATGATGATCACATCATAAGAAAACTTCAAAGTGGAAGCATCTGGTATTTGACAGTGCTTGGTTCTCTTGCTACCACACAGAGGGAGTATATTGCTCTACATGCATTTCGTCGCTTAAATGTGCAGATGCAAACTGCAATCCTTCAGCCTAGTCCTGAACACTTTCCTAAATATGAGCAACAGACCCCAGCCATGCCTGAATGCTTCACACAAAACTTTGTTGAGTATCTGCGCAGAACCTTCAATGAACCCCAGCTGGCAGCAATCCAATGGGCAGCTATGCATACAGCTGCTGGTACAAGTAGTGGGACAACAAAAAGACAAGAACCTTGGCCGTTTACCCTTGTTCAAGGACCTCCCGGAACAGGAAAAACACATACGGTATGGGGAATGTTGAATGTAATTCACCTTGTGCAGTATCAGCACTACTACACCTCTTTACTTAAACATGTAGCCCCTGAAAGCTACAAGCAAGTCAACGAGATCAATTCAGAGAATGCCCCCACTGGATCCATTGATGAAGTTCTTCAAAATATGGACCAGAATCTCTTACGAACTTTGCCTAAACTGGTCCCAAAACCAAGAATGTTGGTTTGTGCCCCATCTAATGCTGCCACTGACGAGCTTCTGGCCCGTGTCCTTGATCGAGGATTTATTGATGGAGAGATGAAAGTATACCGACCTGATGTCGCTCGAGTTGGGGTTGATTCTCAGACACGCGCTGCCCAAGCAGTTTCTGTCGAGCGTAGAACTGAACAGCTTCTTGTTAAGAGTCGGGAAGAAATTTTGGGGTGGATGCATCAGTTAAAAACTCGTGAGGCGCATATGACTCAGCAATTACACTGTCTTCATAGAGAACTAAATGCTGCTGCTGCCGCTGTTCGTTCCCAAGGATCTGTTGGTGTTGATCCTGACCTTCTCATGGCCCGAGACCAGAATCGAGATGCTTTGCTACAAAACCTTGCTGCTATGGTTGAGAACAGGGATAAGGTTCTGGTTGAGATGTCTCGGCTTGCCCTTTTGGAAAGTAGGTTCCGTCCTGGTAGTGGTTTTAATTTGGAAGAGGCTCGTGCTAGTTTGGAGGCCAGTTTTGCTAATGAAGCTGAGATAGTCTTCACTACAGTTTCTAGCAGTGGCCGCAAGTTGTTTTCTCGTCTTTCCCATGGTTTTGATATGGTAGTCATTGATGAAGCAGCCCAAGCCAGTGAGGTGGCAGTCCTGCCTCCCCTCTCTCTTGGGGCAGCAAGATGTGTTCTTGTTGGAGATCCTCAGCAACTTCCGGCTACAGTTATAAGCAAGGCTGCAGGAACATTGATGTACAGTAGAAGTCTTTTTGAAAGGTTCCAACAAGCAGGGTGCCCGACAATGTTGTTGTCTGTGCAGTATAGAATGCATCCCCAAATTCGGGATTTCCCTTCCAGGTACTTCTATCAGGGGCGCCTCACTGATAGTGAAAGTGTGGCTAAATTGCCTGATGAGCCATACTACAAGGACCCTTTACTTAGACCTTATTTATTCTATGATATCAGACATGGGCGAGAATCTCACAGGGGTGGATCAGTCTCTTATCAAAACATACATGAAGCACAATTTTGTCTCCGATTATACGAGCATGTTCAGAAAACATTGAAATCTTTGGGATTAGGAAAGATTACTGTTGGCATAATTACTCCTTATAAGCTGCAGTTGAAGTGCCTCCAACGTGAGTTTGAGGAAGTCTTAAATTCCGAAGAAGGGAAGGATCTATATATCAATACAGTTGATGCTTTCCAAGGTCAAGAACGTGATGTGATTATTATGTCTTGTGTGCGTGCATCAAGTCATGGGGTTGGCTTTGTTGCAGATATACGAAGAATGAATGTTGCCCTTACACGAGCAAGAAGGGCCCTTTGGGTCATGGGAAATGCGAATGCTCTGGTGCAATCTGACGATTGGGCTGCATTGATTGCTGATGCAAAATCTCGAAATTGCTACATGGACATGGACTCCCTTCCTAAGGACTTTCTAGCGTCCAAGGGACTGTCTTACACACCATTGCTTAATAAGGCTTCCTCGAATATGAGGGGCTTGAGATCAGCTGGACCAAGATATAGATCAATGGATATGCATATGGAATCCAGGTTGGGAGCACCGTCTGAAGATGATGAGAAGATGGGTGCTCCAGTAAGCTCCAGAAACGGGAACCATCGTCCATCAAGGTATTCCATGGAGAATTCGTTAGATGATTTTGATCACATGGGTGACAGAACCAGAGATGCCTGGCAGTATGGTATAAAGAAGCAGAATTCCACCGGAGCTATGGGAAAGAGAGACATATAA 4056 0.443 MGSRGRPLFDLNEPPAEDNDERDGSTAAQGIINNHAFSHASSVSGFQPFVRPKSTSVPDTDTELKRVGDQDTKDSSKSSKDEDAKVMDSRVLSSANAQSTEREEGEWSDEEGFADVNGGKNLLQQIQASEEQATSGTVDGGVAVASDSKSSNIKSSNSINHEKSSHASIGLESNSSEQKSNSIPNSESNVKNEASIDAQEEPTLIPKQKEVKGIEASHALRCANNPGKRKIDQRKEEMLGKKRNRQTMFLNLEDVKQAGPIKTSTPRRQTFSSPVISRTIKEVRTIPAQVERVGLPKDQKHVDPSYGEGGNQGEAHEPKSDCNGDTSGLLHVRARRQNSETEPPTEANLPLIPRQGSWKQLTESRQQKSVLVSNRKLGPSGLSSNDVKLGSKKQLSIKKQAPVSSQSQDTSVERLIREVTSEKFWHHPEETELQCVPGRFESLEEYVRVFEPLLFEECRAQLYSTWEESTETVSRDTHIMVRVKANESRERGWYDVKVLPVHEFKWSFKEGDVAILSSPRPGSVRSKQNSSSLSQDDGESEITGRVVGTVRRHSPIDTRDPPGAILHYYVGDSYDSSRVDDDHIIRKLQSGSIWYLTVLGSLATTQREYIALHAFRRLNVQMQTAILQPSPEHFPKYEQQTPAMPECFTQNFVEYLRRTFNEPQLAAIQWAAMHTAAGTSSGTTKRQEPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVAPESYKQVNEINSENAPTGSIDEVLQNMDQNLLRTLPKLVPKPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSVERRTEQLLVKSREEILGWMHQLKTREAHMTQQLHCLHRELNAAAAAVRSQGSVGVDPDLLMARDQNRDALLQNLAAMVENRDKVLVEMSRLALLESRFRPGSGFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAVLPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYFYQGRLTDSESVAKLPDEPYYKDPLLRPYLFYDIRHGRESHRGGSVSYQNIHEAQFCLRLYEHVQKTLKSLGLGKITVGIITPYKLQLKCLQREFEEVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALVQSDDWAALIADAKSRNCYMDMDSLPKDFLASKGLSYTPLLNKASSNMRGLRSAGPRYRSMDMHMESRLGAPSEDDEKMGAPVSSRNGNHRPSRYSMENSLDDFDHMGDRTRDAWQYGIKKQNSTGAMGKRDI* 1352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1056 1351 MobiDBLite consensus disorder prediction 355 409 - -
Apr10g1056 1351 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN-RELATED 1 1310 - -
Apr10g1056 1351 MobiDBLite consensus disorder prediction 253 409 - -
Apr10g1056 1351 MobiDBLite consensus disorder prediction 1 212 - -
Apr10g1056 1351 Pfam AAA domain 1019 1215 IPR041679 -
Apr10g1056 1351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 659 1244 IPR027417 -
Apr10g1056 1351 MobiDBLite consensus disorder prediction 521 539 - -
Apr10g1056 1351 Gene3D - 1041 1247 IPR027417 -
Apr10g1056 1351 Gene3D - 592 1040 IPR027417 -
Apr10g1056 1351 CDD DEXXQc_SETX 660 1042 - -
Apr10g1056 1351 MobiDBLite consensus disorder prediction 1288 1321 - -
Apr10g1056 1351 MobiDBLite consensus disorder prediction 58 88 - -
Apr10g1056 1351 MobiDBLite consensus disorder prediction 26 57 - -
Apr10g1056 1351 Pfam AAA domain 666 1012 IPR041677 GO:0004386
Apr10g1056 1351 MobiDBLite consensus disorder prediction 120 196 - -
Apr10g1056 1351 MobiDBLite consensus disorder prediction 519 542 - -
Apr10g1056 1351 CDD SF1_C_Upf1 1043 1232 IPR041679 -
Apr10g1056 1351 PANTHER DNA2/NAM7 HELICASE FAMILY 1 1310 IPR045055 -
Apr10g1056 1351 MobiDBLite consensus disorder prediction 262 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1056 Apr-Chr10 22944712 22953903 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1056 - K10706 gmx:100794516 2393.23