Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1054 ATGCTTGAATCAATCTTCTTCCTTCTGAGACCTACTCTTCTCTCTTTACTGTGTTCCGAAGGCAAAATGGGTATCATTGAGAAGATCAAAGAAATTGAAGCCGAGATGGCTCGGACCCAGAAAAATAAAGCCACTGAGTACCATCTTGGGCAGCTTAAGGCAAAGATAGCAAAACTGAGGACACAATTATTGGAGCCTCCGAAAGGTTCCAGTGGAGGTGGAGAGGGATTTGAAGTTACAAAATTTGGTCATGGACGAGTTGCACTGATTGGATTTCCAAGTGTGGGAAAGTCTACTCTTTTGACAATGTTAACGGGCACACATTCAGAATCTGCATCTTATGAGTTCACCACTTTGACCTGTATTCCTGGGATTATAAACTATAATGATACCAAAATTCAGTTGCTTGATCTTCCTGGAATTATTGAGGGTGCTTCTGAAGGCAAGGGACGTGGGAGACAGGTTATTGCTGTTGCTAAATCTTCGGACATAGTATTGATGGTTCTTGATGCCTCCAAAAGTGAGGGTCATAGGCAAATATTGACCAAGGAGCTGGAAGCTGTGGGTTTACGGTTAAACAAAAGACCTCCTCAGATATATTTTAAAAAGAAAAAGACAGGCGGCATTTCATTCAACAGCACTTTGCCTTTGACTCATGTGGATGAGAAGCTTTGTTATCAGATTCTGCATGAATACAAGATCCACAATGCAGAGGTCCTTTTTCGTGAGGATGCTACAGTGGATGATCTCATAGATGTCATTGAAGGTAACCGGAAATACATGAAGTGTATATATGTCTACAACAAGATAGATGTGGTTGGTATTGATGATGTGGACAGATTAGCCCGGCAACCTAATTCGGTTGTCATTAGCTGCAATTTGAAGCTGAACTTAGATAGACTACTTTCGAGGATGTGGGATGAAATGGGTCTGGTTAGAGTTTACACAAAACCGCAAGGCCAGCAACCTGATTTCAGTGATCCTGTGGTTCTTTCTGCTGATAGAGGTGGCTGCACTGTAGAAGACTTCTGCAACCACATACACAGAAGTTTGGTGAAGGATGTGAAGTATGTTCTGGTCTGGGGTACAAGTGCAAGGCACTACCCACAACATTGTGGCCTTAGTCATAATCTTCGCGATGAGGATGTGGTTCAGATTGTTAAGAAAAAGGAAAAAGAAGAGGGAGGAAGGGGTCGATTTAAGTCACATTCCACAGCACCTGCTCGGATATCTGACAGAGAGAAGAAGGCACCTCTGAAGACATAA 1266 0.4265 MLESIFFLLRPTLLSLLCSEGKMGIIEKIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPPKGSSGGGEGFEVTKFGHGRVALIGFPSVGKSTLLTMLTGTHSESASYEFTTLTCIPGIINYNDTKIQLLDLPGIIEGASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNKRPPQIYFKKKKTGGISFNSTLPLTHVDEKLCYQILHEYKIHNAEVLFREDATVDDLIDVIEGNRKYMKCIYVYNKIDVVGIDDVDRLARQPNSVVISCNLKLNLDRLLSRMWDEMGLVRVYTKPQGQQPDFSDPVVLSADRGGCTVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLSHNLRDEDVVQIVKKKEKEEGGRGRFKSHSTAPARISDREKKAPLKT* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1054 421 MobiDBLite consensus disorder prediction 390 421 - -
Apr10g1054 421 ProSiteProfiles TGS domain profile. 310 388 IPR004095 -
Apr10g1054 421 Pfam C-terminal region of MMR_HSR1 domain 206 311 IPR031662 -
Apr10g1054 421 Gene3D - 154 259 - -
Apr10g1054 421 Gene3D - 20 118 - -
Apr10g1054 421 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 85 310 IPR031167 GO:0005525
Apr10g1054 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 324 IPR027417 -
Apr10g1054 421 CDD TGS_DRG1 309 389 - -
Apr10g1054 421 PRINTS GTP1/OBG GTP-binding protein family signature 87 107 IPR006073 GO:0005525
Apr10g1054 421 PRINTS GTP1/OBG GTP-binding protein family signature 108 126 IPR006073 GO:0005525
Apr10g1054 421 PRINTS GTP1/OBG GTP-binding protein family signature 135 150 IPR006073 GO:0005525
Apr10g1054 421 PRINTS GTP1/OBG GTP-binding protein family signature 152 170 IPR006073 GO:0005525
Apr10g1054 421 PANTHER - 23 420 IPR045001 GO:0003924|GO:0005525
Apr10g1054 421 CDD DRG 86 317 IPR045001 GO:0003924|GO:0005525
Apr10g1054 421 Pfam TGS domain 312 388 IPR004095 -
Apr10g1054 421 Pfam 50S ribosome-binding GTPase 86 202 IPR006073 GO:0005525
Apr10g1054 421 ProSitePatterns GTP1/OBG family signature. 137 150 IPR006074 GO:0005525
Apr10g1054 421 PANTHER DEVELOPMENTALLY-REGULATED G-PROTEIN 1 23 420 - -
Apr10g1054 421 Coils Coil 22 42 - -
Apr10g1054 421 SUPERFAMILY TGS-like 306 388 IPR012676 -
Apr10g1054 421 Gene3D - 302 395 IPR012675 -
Apr10g1054 421 TIGRFAM small_GTP: small GTP-binding protein domain 86 235 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1054 Apr-Chr10 22932405 22936618 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1054 K06944 - gmx:100778178 750.355