Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1048 ATGTCTTTGATTCGAAGGAGAAAAGGGTCGGAAGCGGAAAAGGGTGATAGGCAGAGTTCAGAACCGAAGGTTAAAGATGAGAAGATTGAAGAAGAAGAAGCAGGAGGAGGAGATGATAAGAAGAAGAAGAAGCAGAAGAAGGTGATGGGTCAGAAGAGGAAGTGGTCGTGTGTAGATAGCTGTTGTTGGTTGGTGGGTTGCATTTGCACGATGTGGTGGTTTCTTCTGTTTTTGTATAAGATGATGCCCGATTCTATTCCTCAGTATGTGACCGAGGCCTTTACTGGGCCCATGCCAGACCCACCAGGCCTCAAACTCAAGAAGGAAGGCCTCACTGTGAAGCACCCTGTGGTCTTTGTGCCAGGGATTGTCACTGGTGGCCTTGAACTTTGGGAGGGTCATCAGTGTTCGGAGGGGTTGTTCAGGAAGCGCTTGTGGGGTGGTACCTTTGGTGAAGTTTACAAAAGACCTTCATGCTGGGTAGAGCACATGTCACTGGACAATGAAACGGGATTGGATCCACCTGGCATAAGAGTCAGGCCTGTCTCTGGACTTGTAGCTGCTGATTACTTTGCTGCAGGATACTTCGTGTGGGCAGTCCTAATTGCTAATTTGGCACGCATTGGTTATGAGGAAAAAACAATGTACATGGCTGCATATGATTGGAGATTATCATTTCAGAACACAGAGGTGAGGGATCAAACACTAAGTCGGATAAAAAGCAACATAGAACTTATGGTTGCTACTAATGGTGGGAATAAGGCAGTTATTATTCCACATTCAATGGGTGTGTTGTACTTTCTTCATTTTATGAAATGGGTTGAAGCACCAGCTCCAATGGGTGGTGGAGGAGGACCAGATTGGTGTTCCAAGTATATAAAGGCGGTTGTAAACATTGGTGGACCATTTTTAGGTGTTCCCAAGGCTATAGCAGGGCTTTTCTCAGCTGAAGCCAGGGATATTGCTGTTGCCAGGACAATAGCTCCGGGATTTTTAGATAATGATCTGTTTCGCCTTCAAACCTTGCAACATGTAATGAGGATGACCCGCACTTGGGACTCAACAATGTCAATGATACCAAAAGGAGGGGACACTATATGGGGTGATCTTGATTGGTCACCAGAAGAAGGTTATGTTCCTAACAAGAGAAAACAAAACTGTAACAACAATACTCAGTTGACTTGCCAAGAGACAAATAAAACACATGCTGTTAACTATGGAAGAATGATATCATTTGGCAGAGACGTGGCAGAGGCACCATCCTCTGAAATTGAGATGGTCGAGTTCCGGGGTGCCATTAAGGGTCACAATGTTGCAAATACCTCTTGTCATGATGTGTGGACTGAGTACCATGACATGGGATTTCAGGGAGTAAAAGCAGTTGCAGAACATAAAGTTTACACAGCTAGCTCAATCATAGATTTGCTTCATTTTGTTGCTCCAAAAATGATGGCTCGTGGTAATGCTCATTTCTCTTATGGAATTGCTGACAATTTGGATGATCCTACATATAATCACTACAGACATTGGTCAAACCCCTTGGAGACCAAGTTACCAAATGCTCCTGACATGGAAATCTTCACCATGTATGGAGTTGGCTTACCAACCGAAAGAGCTTATGTTTACAAGTTAACTCCCTTTGCCAAAGGAGAGTGTTACATTCCCTTTGAAATTGATACAACAGCAGATGGTGGCAGTGATGAAGATAGCTGTCTGAAGGGTGGAGTGTACACTGTTGACGGGGATGAAACTGTGCCAGCTCTAAGTTCAGGCTTCATGTGTGCTAAAGCTTGGCGCGGAAAAACAAGATTTAACCCTTCTGGGATTCGCACTTACGTTAGAGAATACGATCATTCTCCTCCAGCCAACTTGTTAGAGGGTCGTGGTACACAAAGTGGTGCTCATGTTGACATCATGGGAAATTTTGCATTGATTGAGGATGTTATAAGGGTAGCAGCTGGTGCCACAGGAGAAGATCTAGGTGGTGATAGAGTGTATTCTGATATCTTCAAATGGTCTCAGAAAATCAAGTTGCCTCTATGA 2043 0.443 MSLIRRRKGSEAEKGDRQSSEPKVKDEKIEEEEAGGGDDKKKKKQKKVMGQKRKWSCVDSCCWLVGCICTMWWFLLFLYKMMPDSIPQYVTEAFTGPMPDPPGLKLKKEGLTVKHPVVFVPGIVTGGLELWEGHQCSEGLFRKRLWGGTFGEVYKRPSCWVEHMSLDNETGLDPPGIRVRPVSGLVAADYFAAGYFVWAVLIANLARIGYEEKTMYMAAYDWRLSFQNTEVRDQTLSRIKSNIELMVATNGGNKAVIIPHSMGVLYFLHFMKWVEAPAPMGGGGGPDWCSKYIKAVVNIGGPFLGVPKAIAGLFSAEARDIAVARTIAPGFLDNDLFRLQTLQHVMRMTRTWDSTMSMIPKGGDTIWGDLDWSPEEGYVPNKRKQNCNNNTQLTCQETNKTHAVNYGRMISFGRDVAEAPSSEIEMVEFRGAIKGHNVANTSCHDVWTEYHDMGFQGVKAVAEHKVYTASSIIDLLHFVAPKMMARGNAHFSYGIADNLDDPTYNHYRHWSNPLETKLPNAPDMEIFTMYGVGLPTERAYVYKLTPFAKGECYIPFEIDTTADGGSDEDSCLKGGVYTVDGDETVPALSSGFMCAKAWRGKTRFNPSGIRTYVREYDHSPPANLLEGRGTQSGAHVDIMGNFALIEDVIRVAAGATGEDLGGDRVYSDIFKWSQKIKLPL* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1048 680 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 27 680 - -
Apr10g1048 680 PANTHER PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 1 27 680 - -
Apr10g1048 680 Pfam Lecithin:cholesterol acyltransferase 141 640 IPR003386 GO:0006629|GO:0008374
Apr10g1048 680 Gene3D alpha/beta hydrolase 160 334 IPR029058 -
Apr10g1048 680 MobiDBLite consensus disorder prediction 1 44 - -
Apr10g1048 680 SUPERFAMILY alpha/beta-Hydrolases 105 504 IPR029058 -
Apr10g1048 680 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1048 Apr-Chr10 22853966 22858790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1048 157 680 Acyl Lipid Metabolism Gene Families AT5G13640 76.749 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1048 K00679 - gmx:100812643 1202.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1048 10 22853966 22858790 Apr10g1048 10 22853966 22858790 ECH