Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1025 ATGGTTGATAGCAATACTTCTTCTGGATCACCTGAAGAAACTCAAAATCCCATCCCAGATGGGAATGCACCTTCTGAAAGCGATCTTGCATTGGATAATCTAGCACAAAAAGTTCAAGAGTCTCTCTCTTTGGATAAAAGACATAAATTTTGGGAAACCCAACCTGTTGGGCAGTTCAAGGATATAGGGAACACCAGTTTACCAGAAGGCCGCATTGAACCTCCAACCCCCTTATCTGAGGTAAAACAAGAACCATACAACCTTCCTAACCTCTATGAATGGGTTACTTGTGACATCAATTCTGAGCAGATGTGTGATGAGGTATACAACCTTCTTACTAATAATTATGTTGAGGATGATGAGAACATGTTTAGATTTAACTACTCAAAGGAATTTCTGCACTGGGCTCTACAACCTCATGGTTATTTCAGGAGTTGGCATATTGGTGTCCGTGTTAAAAGTTCCAAGAAGATGGTTGCCTTTATAACAGGTGTTCCTGCTAGAATCCGAGTTCGTGACGAGGTTGTTAATATGGCGGAGATTAATTTTCTCTGTGTCCACAAGAAGCTTCGAACAAAGAGGCTTGCCCCTGTCATGATCAAAGAGGTCACCAGGAGGGTGCACTTGGAGAATATGTGGCAGGCAGCATACACTGCTGGAGTGATTCTTCCTACACCAATAGCAACTTGCCAATACTGGCACAGATCGTTGAATCCCAAGAAGCTAATTGATGTTGGTTTCTCTCGGCTTGGTGCACGAATGACAATGAGTCGAACCATCAAGCTTTACAAGCTACCAGAATCAACAGTCACCCCAGGGTTTAGAAAGATGGAAATTCATGATGTTCCTGCAGTTACAAGGCTAATTAGGAATTACTTGAGCCATTTTGTTGTTGCACCCGATTTTGATGAAAATGATGTGGAGCATTGGCTTCTACCAAAGGAGAATGTTGTTGATAGTTATCTGGTTGAAAGTCCTGAAACTCACGAGGTCACTGACTTTTGTAGTTTTTACACTCTTCCTTCTACCATCCTTGGCAACCAAAATTATTCAACTTTGAAAGCAGCTTATTCATTTTATAATGTTTCCACAGTCACCCCTTTGCTTCAGCTGATGAATGATGCTCTCATTGTTGCAAAACAGAAGGATTATGATGTTTTCAATGCATTGGATGTCATGCAGAATGAAACCTTCTTGAGGGAACTGAAGTTTGGACCAGGTGATGGGAAACTTCATTATTATCTTTACAACTACCGAATAAGGCATGCATTGAAGCCATCAGAGCTTGGGCTTGTGCTTCTGTAA 1305 0.4138 MVDSNTSSGSPEETQNPIPDGNAPSESDLALDNLAQKVQESLSLDKRHKFWETQPVGQFKDIGNTSLPEGRIEPPTPLSEVKQEPYNLPNLYEWVTCDINSEQMCDEVYNLLTNNYVEDDENMFRFNYSKEFLHWALQPHGYFRSWHIGVRVKSSKKMVAFITGVPARIRVRDEVVNMAEINFLCVHKKLRTKRLAPVMIKEVTRRVHLENMWQAAYTAGVILPTPIATCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPESTVTPGFRKMEIHDVPAVTRLIRNYLSHFVVAPDFDENDVEHWLLPKENVVDSYLVESPETHEVTDFCSFYTLPSTILGNQNYSTLKAAYSFYNVSTVTPLLQLMNDALIVAKQKDYDVFNALDVMQNETFLRELKFGPGDGKLHYYLYNYRIRHALKPSELGLVLL* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1025 434 Pfam Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain 72 230 IPR022676 GO:0004379
Apr10g1025 434 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 2. 403 409 IPR022678 GO:0004379
Apr10g1025 434 PANTHER GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 9 434 - -
Apr10g1025 434 PANTHER N-MYRISTOYL TRANSFERASE 9 434 IPR000903 GO:0004379|GO:0006499
Apr10g1025 434 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 46 231 IPR016181 -
Apr10g1025 434 PIRSF N-myristl_transf 5 434 IPR000903 GO:0004379|GO:0006499
Apr10g1025 434 Pfam Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain 244 422 IPR022677 GO:0004379
Apr10g1025 434 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 232 434 IPR016181 -
Apr10g1025 434 MobiDBLite consensus disorder prediction 1 22 - -
Apr10g1025 434 Gene3D - 39 434 - -
Apr10g1025 434 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 1. 180 188 IPR022678 GO:0004379
Apr10g1025 434 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1025 Apr-Chr10 22638800 22642555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1025 1 434 Acyl Lipid Metabolism Gene Families AT5G57020 79.724 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1025 K00671 - gmx:100776780 827.394