Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1008 ATGACGACGTCGTCCGGTTCCGTGAAAAACGCGATTCCCCCAACCCTCGTTTCCAATCTCCACCAAGTGTTTCTCAACAGAAACCCTACCAAAGAAGAAGAAGAGAGTAATCATCAAACGAAGAACAATGCTGAACCCTCACATTCACATTCGCATTCCCACTCACAATTCTCCTCTTCTTCATCTACTGAGGACACTGTTCTTGATGGTAGCTCCAAGCCAGTTGTATTAATCACCAACAGTGATGGCATTGATTCCTCAGGTCTCACCCACCTCGTTGATGCGCTCCTGCGTCAAGGCCTCTACGATATTCATGTCTGCGTTCCTCAATCGGACAAATCGGTTTCGGGGCACTCTGTGACTCTTAGAGAAACCGTGGAAGCGTCTTCTGCTGAAATTAGTGGTGCTGCGGCATTTGAAGTTTCGGGATCTCCTGTAGATTGTGTTTCACTAGCATTATCTGGGGCCTTGTTTTCAGGGTCAAGACCTACCCTGGTTATTAGTGGAATTAACAGGGGAACAAGCTGTGGTCATCTCATGTTCTACTCAGGTGTAGTTGCTGGAGCAAGGGAGGCATTGTTATGCGGTGTACCTTCATTGTCTATATCAGTAAATTGGAAGAAGGATGAAAGTCAAGAGACTGATTTCAAGGATGCAGTAGTACTCTGTCTACCATTAATAAATGCTGCTATCAGGGATATTGTAAAGGGAACTTTCCCCAAAAGCTGCTTTTTGAACATAGAAATTCCTACATCGCCTTTAAGCAGCAAGGGCTTCAAATTGACCAAGCAAAGTATGTGGAGATCCACTCCAAACTGGCAAGCAGTTTCAACTACCCGCTATCCTCCCGGTCATTTCTTGGCCAGTAAACAAGGGCTTGGTCTTCAGTTTGCACAGATTGGCCGAGATGCCTCTACTGCTGGTGCAGCTCGTAAATTAACTACACAGAGAAAGAATTTGGAGATTGTTGAATCAATTGGAGCTGCAGGAAAACCTGATTCCAACAGGATAAAGAAGTATTTCAGACTAGAGTTTTTGGAAAAACAACGGGAAGATATAGATGACAATCTGGATTACGGGGCACTTGAAAGTGGATTTGTTGCAGTTACTGCTCTCTCTCTTTCTCCTCATACTGAGAAGAATATTCAAATGGCAGTTTCTGATTGGATTTCATCAGTTCTTCCTAGTGAACAATAA 1197 0.4411 MTTSSGSVKNAIPPTLVSNLHQVFLNRNPTKEEEESNHQTKNNAEPSHSHSHSHSQFSSSSSTEDTVLDGSSKPVVLITNSDGIDSSGLTHLVDALLRQGLYDIHVCVPQSDKSVSGHSVTLRETVEASSAEISGAAAFEVSGSPVDCVSLALSGALFSGSRPTLVISGINRGTSCGHLMFYSGVVAGAREALLCGVPSLSISVNWKKDESQETDFKDAVVLCLPLINAAIRDIVKGTFPKSCFLNIEIPTSPLSSKGFKLTKQSMWRSTPNWQAVSTTRYPPGHFLASKQGLGLQFAQIGRDASTAGAARKLTTQRKNLEIVESIGAAGKPDSNRIKKYFRLEFLEKQREDIDDNLDYGALESGFVAVTALSLSPHTEKNIQMAVSDWISSVLPSEQ* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1008 398 Pfam Survival protein SurE 76 268 IPR002828 GO:0016787
Apr10g1008 398 MobiDBLite consensus disorder prediction 29 68 - -
Apr10g1008 398 PANTHER 5'-NUCLEOTIDASE SURE 5 398 IPR030048 GO:0008252
Apr10g1008 398 Gene3D - 65 392 IPR036523 GO:0016787
Apr10g1008 398 SUPERFAMILY SurE-like 75 385 IPR036523 GO:0016787
Apr10g1008 398 PANTHER 5'-NUCLEOTIDASE SURE-LIKE 5 398 - -
Apr10g1008 398 MobiDBLite consensus disorder prediction 29 48 - -
Apr10g1008 398 MobiDBLite consensus disorder prediction 49 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1008 Apr-Chr10 22527092 22531385 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1008 K03787 - gmx:100776267 560.836