Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1006 ATGATGACTATCTCTACTATTTGGCTGTTGACTCTCTTTTCTGTCATTTGTGGCGGTGGAGCTACCCATGTTTACAGAAATCTTCAGAGTGTATCTTCTGATTCCTCCGATCAACCTTATAGAACTGCTTATCATTTCCAACCTCCAAAGAATTGGATAAATGATCCTAATGGACCAATGAGATACCGGGGAATTTATCATTTGTTCTATCAATACAATCCTAAAGGTGCAATTTCGGGAAATAAAATCTGGGCACATTCTATATCAAAAGATCTTGTGAATTGGACTCCACTAGATCCTGCCATCGATCGAACACAATCGTATGATATCAATGGTTGTTGGTCAGGGTCAGCCACACTGCTTCACGGAGGCAAACCCGTCATTTTATACACAGGAGTTGACTCCTTGCATCACCAAGTTCAAAATTTGGTCTACCCCAAAAATTTGTCCGACCCATTTCTTAGGGAATGGATTAAGTCACCCAAAAATCCTCTTATAGTTCCAACTGATGTTAACAAGATCAATGCAAGTTCATTTAGAGACCCTACCACTGCTTGGCTTGGCAAAGATGGGTATTGGAGGATGCTTGTTGGGAGCAAAATTAACACTATAGGAATGGCACTTTTGTACAAGAGCAAAGACTTTGTTAATTGGGTTGAAGCTGAGCATCCATTATATTCAACCCTAGGCACTGGAATGTGGGAGTGTCCTGATTTCTTCCCAGTTTTGAATAAGAGCAAATCGGGTTTTGACACATCGGTGAATGGTGATGATGTTAAGCATGTACTCAAGGTTAGTTTGGATGACAAAAAGCATGACTATTATCTCATTGGGACTTATAATGCTACCAAGGATATATTTATCCCAGATAAAGAATTTAAGGATATTGAATTTGTTTTAAGATTTGATTATGGAAAATACTATGCCTCAAAAACGTTCTTTGACGATGGAAAGAAGAGAAGAATTTTGTTAGGTTGGGTGAATGAATCCTCAAGTGTTGCGGATGATATCAAGAAAGGATGGTCTGGAATTCATGCAATCCCAAGGGTTATATGGCTGCATAAAACTGGTAAACAATTAGTACAGTGGCCAGTGAAGGAAATTGAACAGTTACGTTCTCATCCAATCAAATGGCATAGCAAAAATCTCAAGGGAGGTGAGCTGCTTCAAATAAATGGAATCACAGCAACACGGGCTGATGTTGAAATTTCATTTGAAGTGAATAGGTTGGGAGAGGCTGAAGTATTGAACTATTGGACGGACCCACAAATTCTGTGTAGTACAAAGGGTTCAGCCGTTAGAATTGGATTGGGACCGTTTGGTTTGCTAGTTTTCGCTTCAAAGGGATTGGAAGAGTACACATCAGTGTTCTTTAGAATATTCAGATACCAACACAAACATTTGGTACTCTTCTGTAGTGACCAAAGCAGGTCTTCTTTGAATGAAGATAATGATAAGACCACTTATGGAACTTTTGTGGACGTGAATCCTCTTCACGAGAAGTTGTCGTTGAGAAGCTTGATTGATCACTCGGTCGTAGAGTCCTTTGGAGGAAAAGGAAAGGCTTGCATGACAGCCAGGGTTTATCCCACATTGGCAATCAATGATGAAGCACAATTGTACGCTTTCATTAATGGAACTAATGATGTTACCATCACAGAATTGAGCGCTTGGAGCATGAAGAAAGCACAAATCAATGGAAGTTAA 1707 0.3966 MMTISTIWLLTLFSVICGGGATHVYRNLQSVSSDSSDQPYRTAYHFQPPKNWINDPNGPMRYRGIYHLFYQYNPKGAISGNKIWAHSISKDLVNWTPLDPAIDRTQSYDINGCWSGSATLLHGGKPVILYTGVDSLHHQVQNLVYPKNLSDPFLREWIKSPKNPLIVPTDVNKINASSFRDPTTAWLGKDGYWRMLVGSKINTIGMALLYKSKDFVNWVEAEHPLYSTLGTGMWECPDFFPVLNKSKSGFDTSVNGDDVKHVLKVSLDDKKHDYYLIGTYNATKDIFIPDKEFKDIEFVLRFDYGKYYASKTFFDDGKKRRILLGWVNESSSVADDIKKGWSGIHAIPRVIWLHKTGKQLVQWPVKEIEQLRSHPIKWHSKNLKGGELLQINGITATRADVEISFEVNRLGEAEVLNYWTDPQILCSTKGSAVRIGLGPFGLLVFASKGLEEYTSVFFRIFRYQHKHLVLFCSDQSRSSLNEDNDKTTYGTFVDVNPLHEKLSLRSLIDHSVVESFGGKGKACMTARVYPTLAINDEAQLYAFINGTNDVTITELSAWSMKKAQINGS* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1006 568 Gene3D Glycosyl hydrolase domain; family 43 49 374 IPR023296 -
Apr10g1006 568 SUPERFAMILY Arabinanase/levansucrase/invertase 36 365 IPR023296 -
Apr10g1006 568 SMART glyco_32 45 520 IPR001362 GO:0004553|GO:0005975
Apr10g1006 568 Pfam Glycosyl hydrolases family 32 N-terminal domain 45 364 IPR013148 -
Apr10g1006 568 ProSitePatterns Glycosyl hydrolases family 32 active site. 45 58 IPR018053 GO:0004553|GO:0005975
Apr10g1006 568 SUPERFAMILY Concanavalin A-like lectins/glucanases 364 562 IPR013320 -
Apr10g1006 568 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 3 566 - -
Apr10g1006 568 PANTHER CELL-WALL INVERTASE 3 566 - -
Apr10g1006 568 Gene3D - 375 560 - -
Apr10g1006 568 Pfam Glycosyl hydrolases family 32 C terminal 367 559 IPR013189 -
Apr10g1006 568 CDD GH32_Fruct1-like 51 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1006 Apr-Chr10 22511500 22515109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1006 60 566 Glycoside Hydrolase AT3G13790 61.748 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1006 K01193 - gmx:100777339 946.421