Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0971 ATGTACGGCGGAGCCTCCTCCAAACTGGGCCGCGCCGCCCCTAAGCGCCTCCACTCCTCTTTTCCCCTGCCTCCGCCGCCTCACCGTCCATCCGCCCCCGCCGGTCGTCTCTCCCTCGGCGCCTCCAACCGCAACGCCGCCCGCGGAGCGCCGGCGGCGGTGGAAGAGACCTTCAACCTTGTCGCCGGAAGCAATCCCCTCGCCTTCTCTATGATTATAAGGCTGGCACCCGACCTCGTTGAGGAGATCAAGCGCGTGGAGGCACAGGGCGGCACCGCGCGCATGAAGTTCGACCCCAACCCCAACCATCCCAACGGAAACATTATTGATGTTGGTGGGAAGGAGTTCAGATTTACCTGGTCGAGGGAATTTGGTGACCTCTGCGATATCTATGAAGAGCGTCAAAGTGGCGAAGATGGAAGTGGCTTGCTTGTTGAATCAGGATGTGCCTGGCGCAAGCTGAATGTGCAGCGTATCTTGGATGAGTCAACCAAGAATCACGTCAAAATGCGGTCGGAGGAAGCTGAACGCAAGCTAAAGTCTCGCAAAGCCATTGTCTTAGAGCCTGGGAACCCGTCTATGAAAAGCCAGATAAAGGCATTAGCAGCTGTTGAAGCTACACCTTGGAAGAATTACAATAAAAAGAAAGAGGCTGCACTTAAGAAAAGGAAAGTAGAAACCCTTCAAGTTGGAGGCCCCCCAAAATCTTCCCATAGATCTGGATTGACTTCAACAAGTACTACTATCAAGGGCAGACAATCCTCTCCTCTTCCATCTCCACCAGATCCTTTTGCTGCTTCATCCTCTCCACTGGGGGCTGTAAATATGTCTAAGAGCTTTGAGGATGCTCTTCCATCACAAATGACAGGCAAGCAAGATACTAATGCTGTCTCTGAGAAAGAAATCCCTACAAGGACAAACAATGCTATGAGGAACACACCAGGAGGCAAGGGAAATAGTGGATCTAAACCAATAGATTTGCAGGGCATGTTAATATCTCTTCTTAAGGATAAACCTAATGGAATGACTTTGAAGGCCTTGGAGAAAGCTGTTGGAGACACACTTCCAAATTCCATAAAGAAAATTGAGCCAATTATTAAAAAAATTGCAAAGTACCAGGCCCCAGGAAGGTATATTTTGAAACCAGGAATGGATTTGGAAAACTCAAAGAAACCACAGACTGAAAGTGGAAGTTCTCCTGATGACAATCGTAGCCAGATACCTGCTCGTGAAGAGTTTCATGATCAGACATCAGCTCCACAGGGAGGCTGTGAAGAGAAAGTCCCAAATGATGATTTGGAGGAAATGGTTCAAGTAAAATCCAAAGTGGAAGAAGAATCAAACACATTGGAAAAAGTTGATGCCCAACATACTTCACCTGAAGGGCAGGCGGGCAGCTCTAGTGATAGTGGAAGTGACAGTGACAGTGAAAGTGACAGCAGTGATAGTGGAAGTGACAGTGGAAGCCATAGTAGGAGCAGAAGCAGAAGTCCTGCTGGAACAGGGAGTGGGAGTAGTAGTGACAGTGAAAGTGATGCATCTTCCAGTAGTAAGGAGGGACTTGAGGGCTCTGATGAGGATGTAGATATTATGACAAGTGATGATGAAAAAGAGCCAAAGCCAAAACCAGAAGCTTCTGACCAAAGGATGACCTTACAGGTTCCAGTAAAATCTCCTGAGATTGATGAGAAGCAGAATGGTAATGAATCTGATGCAGTTGAAATTGAAAAGGACATACCGGAGGAACAGGAGGCTGAAATGGCTCTACCTATGGCTACCATTTCCAATAGAAGTGGAAAATATGCTGAAGAGACACAACCTTTTTCACTTGACTATCAACAGCTCCAGGAACGCCAAAATTATATTGGGAGTTTGTTTGATGAAAGGGAAAATGAGGTCAAGGATAGCTCTAGGCATGAGCAGTCTGACAGCTCCTATAGGTTATCCAAAGGTAAATGTAGGAGGGGTTCTGATGTGAGGAGCACTGATGAGCGATCTGAGCGTACAAAGAGATCTAAAGCAGGAAAGTTGACTCATGAACCATTTTCTCCTGGAATGGATGTGCAGACATTTGAGAATTCTCGGAGTTTGTCTCCTTTTGAATTTACTGAAGACACTTGTAAGGGCCCCCAGATGCAAATGTTGAACAGAGCTGATAAACAAGGAAATTCCAGTGTTGGCTTACAGAAAGGATTTAATCAAGCATTTCCTGGAAAATCTAGTTCAGATTTACCCCAAAAAAATCAAAGGTCCTTGGATCAAACTCATCCCGGAAACCCTTCCTACCCATTAGAAAAATCAGTTAAAAAAGGTGAAAGTGTAAGGCATGGCAAAAAACATTCAAGAAAAGGCTTTCATGCACGTGAAGTTTATTCTGTGCAGAAAGATAAATCCCATAAAGATGCCTTAAATGCAGATATTCATGCCACAGATAAAAAAGTCCCCAGGAATTCCAGGGATGGTACTGATGGAAGTAAACAGTCACTATCCATGGATTCTTATTACCAAAAACAAGGTGAAATGGTTGGTAAGTTAAAGGAAGGCCAACAAGGTGTGCAGTCACAGTTGGGAACATCACCTAAAGACAAGAATAGATTTGGTCTTGATAAATCACTTCAAAGAGAGCTTTCAGACCTGGAGTTGGGTGAATTTCGTGAGTCCACACCTGATGAGACTCACATGGCAAAACAATTTGAACAAAAAGATTCGTTTAAACGTTTGGAAATCAAAGCAAACATGTCAGAGGACAGGAATTCTGATATTACTAAAGTAAAACCTTCATCTAAAGCAACTTCAGATTCTGGAAAGCAATCCTCAGTCTTTGTAAATTCTGGTTTTCCCAGTAATTCGGAAAGCGCAAATAAAAAGAACTCAGATAATCATTTTGAAGATTCAACAAGATCTCGTTCTAGAGTTATGCAGACTCATTCACAACATTTAAAAGCAGATCATGCAGAAGTTGGAGCTCAAAACAAATTGGCAGAAATGAGTGGTAAATTTAGAAATAATGAATCTGGGGTGAGCCAAGATATTGATTTGGAAGGTCGCAGTGAAAGCAACAGAAGAGCGTCTGCAAATGCATCTAAACAAGACAGTAGACGTGGAATGGCTTCCTACCCAGTGAAAGAAAGTAAAAGACAGACACCTAATTCAGTGGAAGAGATGGCTGATGGAGGAAAGGATTCTGTGTTTGCAGATAGAAATATTAGTGATCAGAAGAAGAGAGAATCATCTTCAGATGAAAATAGTTGCTCATATTCAAAGTACGAAAAGGATGAACCTGAATTGAGGGGACCTATAAAGACTTACTCCCAATATAAAGAATATGTGCAGGAGTATCGTGATAAATATGATAGTTACCTCTCCTTGCACAAGATTTTGGACGGTTACAGGGATGAGTTTCAGAAACTAGGCGACGAATTTAAATGTGCTAAAGGTGATAGATGTAACGAAATTGTGGAGCAGATCAGAGAATCCTATCGACGTTGTGGACCGAGACACAAGAGATTGAAGAAAATATTTGTTGTGCTTCACCATGAACTGGAGAATATTAAGCAAAGGATCAAAGACTTTGCAGAGTGGTATACTAAAGAATGA 3597 0.4345 MYGGASSKLGRAAPKRLHSSFPLPPPPHRPSAPAGRLSLGASNRNAARGAPAAVEETFNLVAGSNPLAFSMIIRLAPDLVEEIKRVEAQGGTARMKFDPNPNHPNGNIIDVGGKEFRFTWSREFGDLCDIYEERQSGEDGSGLLVESGCAWRKLNVQRILDESTKNHVKMRSEEAERKLKSRKAIVLEPGNPSMKSQIKALAAVEATPWKNYNKKKEAALKKRKVETLQVGGPPKSSHRSGLTSTSTTIKGRQSSPLPSPPDPFAASSSPLGAVNMSKSFEDALPSQMTGKQDTNAVSEKEIPTRTNNAMRNTPGGKGNSGSKPIDLQGMLISLLKDKPNGMTLKALEKAVGDTLPNSIKKIEPIIKKIAKYQAPGRYILKPGMDLENSKKPQTESGSSPDDNRSQIPAREEFHDQTSAPQGGCEEKVPNDDLEEMVQVKSKVEEESNTLEKVDAQHTSPEGQAGSSSDSGSDSDSESDSSDSGSDSGSHSRSRSRSPAGTGSGSSSDSESDASSSSKEGLEGSDEDVDIMTSDDEKEPKPKPEASDQRMTLQVPVKSPEIDEKQNGNESDAVEIEKDIPEEQEAEMALPMATISNRSGKYAEETQPFSLDYQQLQERQNYIGSLFDERENEVKDSSRHEQSDSSYRLSKGKCRRGSDVRSTDERSERTKRSKAGKLTHEPFSPGMDVQTFENSRSLSPFEFTEDTCKGPQMQMLNRADKQGNSSVGLQKGFNQAFPGKSSSDLPQKNQRSLDQTHPGNPSYPLEKSVKKGESVRHGKKHSRKGFHAREVYSVQKDKSHKDALNADIHATDKKVPRNSRDGTDGSKQSLSMDSYYQKQGEMVGKLKEGQQGVQSQLGTSPKDKNRFGLDKSLQRELSDLELGEFRESTPDETHMAKQFEQKDSFKRLEIKANMSEDRNSDITKVKPSSKATSDSGKQSSVFVNSGFPSNSESANKKNSDNHFEDSTRSRSRVMQTHSQHLKADHAEVGAQNKLAEMSGKFRNNESGVSQDIDLEGRSESNRRASANASKQDSRRGMASYPVKESKRQTPNSVEEMADGGKDSVFADRNISDQKKRESSSDENSCSYSKYEKDEPELRGPIKTYSQYKEYVQEYRDKYDSYLSLHKILDGYRDEFQKLGDEFKCAKGDRCNEIVEQIRESYRRCGPRHKRLKKIFVVLHHELENIKQRIKDFAEWYTKE* 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0971 1198 MobiDBLite consensus disorder prediction 956 988 - -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 996 1013 - -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 233 255 - -
Apr10g0971 1198 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 8 1197 - -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 389 404 - -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 218 272 - -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 285 324 - -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 285 319 - -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 481 518 - -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 598 621 - -
Apr10g0971 1198 SUPERFAMILY occludin/ELL-like 1099 1193 - -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 1059 1091 - -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 821 835 - -
Apr10g0971 1198 Pfam Occludin homology domain 1098 1192 IPR010844 -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 453 474 - -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 863 923 - -
Apr10g0971 1198 Gene3D - 1101 1194 - -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 382 1091 - -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 427 452 - -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 716 761 - -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 623 677 - -
Apr10g0971 1198 ProSiteProfiles Occludin/ELL (OCEL) domain profile. 1091 1196 IPR010844 -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 924 955 - -
Apr10g0971 1198 Coils Coil 433 456 - -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 786 820 - -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 687 701 - -
Apr10g0971 1198 MobiDBLite consensus disorder prediction 1 39 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0971 - - gmx:102660010 1776.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0971 10 22206228 22213947 Apr10g0971 10 22206228 22213947 ECH