Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0965 ATGGTGGGTTCCTTCAACTGGGTTCATTGTTTTTTCATCATTTTTCATGTCTTTGCTGCAACATCCATATACTCATCAACCTTCGCCTCAACGCAACTCTCCACAAACTTTCTAGACATAGCCAAGAAACCTGAGGTTTTCGATTGGATGGTCAAAATCAGAAGGAAGATTCACGAGAATCCTGAACTGGGTTATGAGGAATTTGAGACTAGTAAGCTTATCAGAGCTGAATTGGATAAATTGGGAATCCCCTATAAACACCCAGTTGCAGTCACTGGTGTTATTGGTTTCATAGGTACAGGAATGTCGCCTTTTGTTGCGTTAAGAGCTGATATGGATGCTCTTCCCATCCAGGAAAAGGTGGAGTGGGAGCACAAGAGTAAAGTACTTGGAAAGATGCATGCTTGTGGCCATGATGCTCATGTTACCATGCTTCTAGGTGCTGCAAAGATTCTCAAGGATCATGAAAAAGAAATACAAGGAACTGTAGTTCTTGTTTTTCAACCAGCAGAGGAAGGAGGTGGAGGGGCTAAGAAAATTTTAGATGCTGGAGTATTGGAAAATGTTACAGCTATTTTTGGATTGCATGTGACACCAAACTTTGCAATAGGTGAAGTAGCCTCTAAATCTGGTCTAATGTTGGCACGAAGTGGTGTTTTTGAAGCAAGAATAGGTGGAAAAGGAGGTCATGCAGCTATTCCTCAACATTCTATAGACCCCATATTGGCAGCTTCTAATGTGATTATTAGCTTACAACATCTTGTCTCTCGTGAAGCTGATCCTCTAGACTCCCAAGTTGTGACAGTAGGAAAATTCGAAGGAGGTTCTGCATTCAATGTTATTCCAGATTCTGTCACAATCGGTGGCACCTTCCGAGCTTTTTCTAAACAAAGCTTTCAGCAATTAAGACAGCGCATTGAGCAGATTGTGACTGGGCAAGCTAGTGTCCAAAGGTGCAATGCAACGGTCAACTTCCTTGAAGAAGAGAAGCCTTTCTTTCCAGCAACTATAAACAATGGTGACTTGCATGTTCATTTTCAGAATGTTGCATGGGATTTGCTAGGCATCAATAAAGTTCATGACATGAAATCATTGATGGGAGCTGAAGATTTTTCATTCTATCAAGAGGTTATGCCTGGCCACTTTTCCATGCTTGGAATGATGAATGCCTCACATGAAAGGCTTGAGCAACTGCACACACCCTTTTTCAAGGTCAATGAAGATGTTCTTCCTTATGGGGCTACTCTTCATGCCTCATTAGCTGTTAATTATCTTCTAAAATATTCCCAAGATGTACCTATTCTAGATGCCAAGTACCACAATGAATTGTAA 1332 0.4122 MVGSFNWVHCFFIIFHVFAATSIYSSTFASTQLSTNFLDIAKKPEVFDWMVKIRRKIHENPELGYEEFETSKLIRAELDKLGIPYKHPVAVTGVIGFIGTGMSPFVALRADMDALPIQEKVEWEHKSKVLGKMHACGHDAHVTMLLGAAKILKDHEKEIQGTVVLVFQPAEEGGGGAKKILDAGVLENVTAIFGLHVTPNFAIGEVASKSGLMLARSGVFEARIGGKGGHAAIPQHSIDPILAASNVIISLQHLVSREADPLDSQVVTVGKFEGGSAFNVIPDSVTIGGTFRAFSKQSFQQLRQRIEQIVTGQASVQRCNATVNFLEEEKPFFPATINNGDLHVHFQNVAWDLLGINKVHDMKSLMGAEDFSFYQEVMPGHFSMLGMMNASHERLEQLHTPFFKVNEDVLPYGATLHASLAVNYLLKYSQDVPILDAKYHNEL* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0965 443 SUPERFAMILY Zn-dependent exopeptidases 45 426 - -
Apr10g0965 443 Gene3D Zn peptidases 50 410 - -
Apr10g0965 443 PANTHER PEPTIDASE M20 FAMILY MEMBER 9 443 IPR017439 GO:0016787
Apr10g0965 443 Gene3D - 215 333 - -
Apr10g0965 443 PIRSF Amidohydrol_AmhX 36 428 IPR017439 GO:0016787
Apr10g0965 443 PANTHER AUXIN CONJUGATE HYDROLASE 9 443 - -
Apr10g0965 443 CDD M20_IAA_Hyd 50 425 IPR044757 GO:0009850|GO:0016787
Apr10g0965 443 TIGRFAM amidohydrolases: amidohydrolase 50 412 IPR017439 GO:0016787
Apr10g0965 443 Pfam Peptidase family M20/M25/M40 107 422 IPR002933 GO:0016787
Apr10g0965 443 Pfam Peptidase dimerisation domain 220 311 IPR011650 -
Apr10g0965 443 SUPERFAMILY Bacterial exopeptidase dimerisation domain 219 325 IPR036264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0965 Apr-Chr10 22154012 22157090 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0965 K21604 K14664 gmx:100789077 721.079