Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0946 ATGAGAACTAAGATAGTTGTTTTCTTTCTTGCTACCATTTTAGCATCATGCCATGGCTTAGAGCATGGTGCTAACTTTCAAATTTTCCCTCTCCGAATGAAAACTGGTTCTGGTGGCCATTACATTCCCGAGGTATCATGCCTAAGTTGGAGGCTTGGTGTTGAAGCCCATAACATGATTGACTGGAAAACTGTTCCTGAAGAATGCAAAGATTATATTGGAAACTATATTATTGGTGATCAATATAGATCAGACTCTAAAACAGTTTGCCGTGAAGCTTATCTTTATGCTAAGAAACTCAATCTCACTGCCAAAGACATTTTCGTGTTCGACGTAGATGAAACTACACTCTCCAATCTCCCATATTATGCTAACCATGGTTTTGGGGTGGAACCATATAATCCAACGTTGTTTAATGAATGGGTAGACCAAGGATCAGCACTAGCACTGCCTGAGAGTCTTAAACTGTACAACAAATTGGTGTCTCTTGGCATCAAGATTGTATTCTTGACTGGAAGACCAGAGAATCAAAGGGATGTAACTGCTACCAACTTAAAGAGTGTTGGATACCACACATGGGAGAAGCTAATTGTCAAGGATACATCAGTGTATGCGGGCAAAACAGCAGTTACATACAAATCAAGTGAGAGGAAGAAGCTGGAATCACAGGGATACAGAATCATTGGAAACATTGGTGACCAATGGAGTGATATTCTGGGAACCAACACAGGCGATAGAACCTTTAAGTTGCCAGATCCTATGTACTACATTAGTTGA 777 0.4028 MRTKIVVFFLATILASCHGLEHGANFQIFPLRMKTGSGGHYIPEVSCLSWRLGVEAHNMIDWKTVPEECKDYIGNYIIGDQYRSDSKTVCREAYLYAKKLNLTAKDIFVFDVDETTLSNLPYYANHGFGVEPYNPTLFNEWVDQGSALALPESLKLYNKLVSLGIKIVFLTGRPENQRDVTATNLKSVGYHTWEKLIVKDTSVYAGKTAVTYKSSERKKLESQGYRIIGNIGDQWSDILGTNTGDRTFKLPDPMYYIS* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0946 258 SUPERFAMILY HAD-like 100 255 IPR036412 -
Apr10g0946 258 TIGRFAM plant-AP: plant acid phosphatase 44 257 IPR010028 GO:0003993
Apr10g0946 258 PANTHER VEGETATIVE STORAGE PROTEIN 1-RELATED 6 257 - -
Apr10g0946 258 CDD HAD_VSP 75 257 - -
Apr10g0946 258 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 39 257 IPR005519 -
Apr10g0946 258 Gene3D - 42 258 IPR023214 -
Apr10g0946 258 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Apr10g0946 258 PIRSF VSP 1 258 IPR014403 -
Apr10g0946 258 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 6 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0946 Apr-Chr10 21976902 21980100 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0946 - - gmx:547669 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0946 10 21976902 21980100 Apr10g0946 10 21976902 21980100 ECH