Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0945 ATGGGAACGAAGGTAGTTTTTTGTTTTCTTGCTACAGTCATAGCAACATGCCATGGATTAGAGCATGGCACAACCCATCAAGTGTTTCCTCTCCGAACGAAATCTGGCTCCGGTGGGCACTACATTCCGAACCTTACTTGCTCAAGTTGGAGGGTTGGCGTGGAAGCACACAACATCATTCAGTGGAAAACTATTCCACAAGAATGCGAAGGATATATAGGAAACTACATTCTAGGTGATCAATATAGATCAGACTCCAAAACAGTGTGTCGTGAAGCTTATTTTTATGCCAAGGGTCTCAGTTTCGAAAGACACGACAAAAACATATGGGTGTTTGATATTGACGAGACTTCACTGTCTAATCTCCCATATTATGCTCGCCACGGATTTGGGGTGGAACCATTTAATGAGACATCGTTTAATGAATGGGTGGAGCTTGGCATAGCACCAGCACTGCCGGAGAGTCTTAAACTGTACAACAGATTGTTGTCTCTTGGCATCAACGTTGTATTCTTAACAGGAAGACCAGTGGATCAAAAGGATGTAACGGTTAAGAACTTAAAGCTTGTTGGATACCACACGTGGGAAAAGTTAATTTTCAAGGATCCATCATATTTTGGTAAAACAGCAGTTACATACAAATCAGATGAGAGGAAGAAGCTGGAAACACAAGGATACAAAATCATCGGAAACATTGGAGACCAATGGAGTGATATTCTGGGAACCAACACAGGCAATAGAACCTTTAAGTTGCCAGATCCTATGTACTACATTAGTTAA 780 0.4154 MGTKVVFCFLATVIATCHGLEHGTTHQVFPLRTKSGSGGHYIPNLTCSSWRVGVEAHNIIQWKTIPQECEGYIGNYILGDQYRSDSKTVCREAYFYAKGLSFERHDKNIWVFDIDETSLSNLPYYARHGFGVEPFNETSFNEWVELGIAPALPESLKLYNRLLSLGINVVFLTGRPVDQKDVTVKNLKLVGYHTWEKLIFKDPSYFGKTAVTYKSDERKKLETQGYKIIGNIGDQWSDILGTNTGNRTFKLPDPMYYIS* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0945 259 CDD HAD_VSP 75 258 - -
Apr10g0945 259 Gene3D - 42 259 IPR023214 -
Apr10g0945 259 SUPERFAMILY HAD-like 107 256 IPR036412 -
Apr10g0945 259 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 7 258 - -
Apr10g0945 259 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 39 258 IPR005519 -
Apr10g0945 259 TIGRFAM plant-AP: plant acid phosphatase 44 258 IPR010028 GO:0003993
Apr10g0945 259 PIRSF VSP 2 259 IPR014403 -
Apr10g0945 259 PANTHER VEGETATIVE STORAGE PROTEIN 1-RELATED 7 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0945 Apr-Chr10 21973535 21975059 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0945 - - gmx:547669 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0945 10 21973535 21975059 Apr10g0945 10 21973535 21975059 ECH