Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0917 ATGTCTGGTTGGTCACCTGAAAACGCCAAGAGAGCATATCTTCAAGCACTAAATATGGCCAAAAGAGGTAAAGAACCTGATGTAGCTGAGTTTATATCTGCTCTAGCAGCAGGCAATAATGCACAACTCATGGTGGTCGCCGGCGCCAGCGTGGCCGGTTCAGCCGCGCTAGCTCTGGCTGCAGCTGCTCACCAAACTGGTGGCCGTGTGGTTTGCATTTCATTTGGACAAATTGAATCACAAGCATCACGAAAAGCACTAGGAGTTTATGGAGATTGTGTTGAGTTTGTTGTAGGAGATGTGAAAAGCCTTGTACTTGGTGATTACAAAGGAGCTGATTTTGTGCTTGTAGATTGTGACATGACCAATGCAAGGGAAATTTTCTTAGCAGCATTTAAAGGGGCAAAAGATGGGGCACTTGTGGTTGGATATAATGTCAAGCATAGGGTCTCACGGTGGAGACAATTGAGGGCATCGTTTTTACCCATTGGAGAAGGGTTGTTGGTGACTAAAATTGACCCAAATTTGAAGGCATTAAATGACAGGGTTGTCCATAGAAGGAAGAATCGTTGGATTGTTCATGTAGATAACCACACCGGAGAGGAACATATTTTTAGGGTCACATCTCCTTATAAGAAACTGCAGATGGGAATTTAA 657 0.4414 MSGWSPENAKRAYLQALNMAKRGKEPDVAEFISALAAGNNAQLMVVAGASVAGSAALALAAAAHQTGGRVVCISFGQIESQASRKALGVYGDCVEFVVGDVKSLVLGDYKGADFVLVDCDMTNAREIFLAAFKGAKDGALVVGYNVKHRVSRWRQLRASFLPIGEGLLVTKIDPNLKALNDRVVHRRKNRWIVHVDNHTGEEHIFRVTSPYKKLQMGI* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0917 218 PANTHER DUF1442 FAMILY PROTEIN 1 210 - -
Apr10g0917 218 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 169 IPR029063 -
Apr10g0917 218 PANTHER DUF1442 FAMILY PROTEIN 1 210 IPR009902 -
Apr10g0917 218 Pfam Protein of unknown function (DUF1442) 4 206 IPR009902 -
Apr10g0917 218 Gene3D Vaccinia Virus protein VP39 6 171 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0917 Apr-Chr10 21666773 21667688 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0917 - - gmx:100783654 325.479