Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0907 ATGTCCCAGCTGAAGCAAATGTCGCATATTGACAGTGCCCCTTCTACCCCAGGCAAGTTCAAGATGGAGAAAGCTTCATACTTCAACCGCGTGCGGTGGCACACCTCGCTCGCCAAGCTCGCCGTGTGGTCCTTCGTCTTCTTGGCCGCGATCTTGATCTTCTTTTTCCGGTCTCCGGCGTCGTCGCCGATTCCGGTGGATCCTTCCCGGCGCTCCCTGAGGACCTACAATTGGGGCGGACCCGTTTGGGAAAAACGGGTTCGGTCATCGGCCCGTGTCCGGTCCCGGAATGGCTTCGCCGTTCTGGTCACCGGAGCCGCCGGTTTTGTTGGCACCCACGTCTCTGCGGCACTTAAGCGCCGCGGCGATGGGGTACTGGGAATTGACAATTTCAATGACTATTATGATCCTTCATTGAAGCGTGCACGGCAAGCTCTTTTGGAGCGCACTGGGGTGTACATTGTGGAAGGGGATATCAATGATGAAGCACTTTTGAGGAAGCTATTTGAGGTTGTGCCTTTTACTCATGTGATGCATTTGGCTGCTCAAGCTGGTGTGAGGTATGCTATGGAGAATCCTGGCTCTTATGTTCATAGTAACATTGCTGGCTTTGTTAATTTGCTTGAGGTTTGTAAGAGTGTGAATCCTCAACCGGCTATTGTGTGGGCTTCTAGTAGCTCAGTTTATGGACTTAACACTAAGGTTCCCTTTTCTGAGAGGGATAGGACTGATCAACCTGCTAGTTTGTATGCTGCTACTAAGAAAGCTGGTGAAGAGATTGCTCACTCTTATAACCATATATATGGTCTTTCATTGACTGGATTGAGGTTCTTCACTGTTTATGGCCCTTGGGGTAGGCCTGATATGGCTTACTTCTTTTTCACTAGGGATATTTTGAAAGGGAAGGCAATCTCAATATTTGAGGCTGCGAATCATGGCACAGTTGCCAGAGATTTTACTTACATTGATGATATTGTGAGGGGTTGTTTGGGTGCTTTGGATACTGCTGAGAAGAGCACCGGGAGTGGTGGGAAGAAGACCGGGCCGGCGCAGTTAAGGGTGTTCAATTTGGGGAATACTTCACCGGTGCCGGTTAGTGAGCTTGTGAGCATTTTGGAGAGGCTCTTGAAGGTTAAGGCAATGAGGAACATAATGAAGTTGCCGCGGAATGGGGATGTGCAGTTTACTCATGCGAACATTAGCTATGCGCAGAGGGAGCTTGGGTATAAGCCTACCACAGATCTGCAGAGTGGTTTGAAGAAATTTGTGCGGTGGTACATGAATTACTACTCTGGTGGGAAGAAGGCTGTTGAGTGA 1317 0.4943 MSQLKQMSHIDSAPSTPGKFKMEKASYFNRVRWHTSLAKLAVWSFVFLAAILIFFFRSPASSPIPVDPSRRSLRTYNWGGPVWEKRVRSSARVRSRNGFAVLVTGAAGFVGTHVSAALKRRGDGVLGIDNFNDYYDPSLKRARQALLERTGVYIVEGDINDEALLRKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSVNPQPAIVWASSSSVYGLNTKVPFSERDRTDQPASLYAATKKAGEEIAHSYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEAANHGTVARDFTYIDDIVRGCLGALDTAEKSTGSGGKKTGPAQLRVFNLGNTSPVPVSELVSILERLLKVKAMRNIMKLPRNGDVQFTHANISYAQRELGYKPTTDLQSGLKKFVRWYMNYYSGGKKAVE* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0907 438 PANTHER EPIMERASE-RELATED 10 436 - -
Apr10g0907 438 Pfam NAD dependent epimerase/dehydratase family 101 338 IPR001509 -
Apr10g0907 438 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 98 431 IPR036291 -
Apr10g0907 438 PANTHER UDP-GLUCURONATE 4-EPIMERASE 2-RELATED 10 436 - -
Apr10g0907 438 Gene3D - 100 432 - -
Apr10g0907 438 PRINTS Nucleotide sugar epimerase signature 127 143 - -
Apr10g0907 438 PRINTS Nucleotide sugar epimerase signature 317 332 - -
Apr10g0907 438 PRINTS Nucleotide sugar epimerase signature 352 367 - -
Apr10g0907 438 PRINTS Nucleotide sugar epimerase signature 392 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0907 Apr-Chr10 21546922 21549347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0907 4 436 Miscellaneous Gene Families AT4G00110 87.067 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0907 K08679 - gmx:100788739 822.772