Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0906 ATGGCCCAAGTCACCAGAATCCACAATCTGGTTCAAAGTACTCAAATTTTGCACCATTCTTCAAACACCCACAAACCCAAATCAGCAAACTCGCTTTCATTGAGGTCACGTCCTTGGGGGACCTCAAAAGCTTGGAGTTTGATGCATAAAAATGAAAGCTTTTTGGGAAATTGTAATGTGGGTAAGGGAAAATCGGGTGTGTTGAAGGTTTCTGCATCGGTTGCCGCCGCAGAGAAGCCGTCGATGGCGCCGGAGATCGTGTTGGAACCCATCAGAGATATCTCGGGTACCATTACATTGCCTGGCTCTAAGTCTCTATCCAATCGAATTCTGCTTCTTGCTGCTCTCTCTGAGGGAACAACTGTTGTAGACAACTTGTTGAATAGCGAGGATGTTCATTACATGCTTGGTGCATTAAGGACCTTGGGACTGCGTGTGGAAGACGACAAAACAACCAAAAAAGCAATTGTAGAAGGCTGTGGGGGATTGTTTCCCACTGGTAGAGATTCTAAAGATGAAGTCAATTTATTCCTTGGAAATGCTGGTACTGCAATGCGTCCTTTGACAGCAGCTGTGACTGCTGCTGGCGGAAATGCAAGCTACGTACTTGATGGGGTGCCCCGAATGAGAGAGAGGCCTATTGGGGATTTGGTTGCTGGTCTTAAGCAGCTTGGTGCAGATGTTGATTGTTTTCTTGGCACAAACTGTCCACCTGTTCGTGTAAATGGGAAGGGAGGACTTCCTGGGGGAAAGGTGAAACTTTCTGGATCAGTTAGCAGCCAATACCTGACTGCTTTGCTTATGGCAGCTCCTTTAGCTCTTGGTGATGTGGAAATTGAGATTGTTGATAAACTTATTTCTGTTCCATATGTTGAAATGACTTTGAAGTTGATGGAGCGCTTTGGAGTTGCTGTTGAACATGATGGTAATTGGGATAGGTTCTTGGTCCATGGAGGTCAAAAGTACAAGTCTCCTGGCAATGCTTTTGTTGAAGGTGATGCTTCAAGTGCCAGTTACTTCCTAGCTGGTGCAGCAGTTACTGGTGGGACTATCACTGTTAAAGGCTGTGGGACAAGCAGCTTGCAGGGAGATGTAAAATTTGCTGAAGTTCTTGAAAAGATGGGAGCTAAAGTTACATGGACAGAGAACAGTGTCACAGTTACTGGCCCACCACGCGATTCTTCTAGCCAAAAAGTCTTGCAAGGCATTGATGTCAATATGAACAAGATGCCAGATGTTGCCATGACACTTGCTGTTGTTGCACTATTTGCCAACGGTCCCACTGCTATAAGAGATGTGGCAAGTTGGAGAGTTAAAGAGACAGAGAGAATGATAGCAATCTGCACAGAACTCAGAAAGGTGAGTTATCTCACCGACATACTCTTGGTATTTCAGCTAGGAGCAAAAGTTGAAGAAGGTCCTGATTACTGTGTGATTACTCCACCTGAGAAATTGAATGTCACAGCTATAGACACATATGATGACCATAGAATGGCCATGGCATTTTCTCTTGCTGCTTGTGGAGATGTTCCAGTCACCATCAAGGATCCTGGTTGCACCAGGAAAACATTCCCTGATTACTTTGAAGTCCTTGAGAAATTTACCAAGCATTAA 1614 0.4486 MAQVTRIHNLVQSTQILHHSSNTHKPKSANSLSLRSRPWGTSKAWSLMHKNESFLGNCNVGKGKSGVLKVSASVAAAEKPSMAPEIVLEPIRDISGTITLPGSKSLSNRILLLAALSEGTTVVDNLLNSEDVHYMLGALRTLGLRVEDDKTTKKAIVEGCGGLFPTGRDSKDEVNLFLGNAGTAMRPLTAAVTAAGGNASYVLDGVPRMRERPIGDLVAGLKQLGADVDCFLGTNCPPVRVNGKGGLPGGKVKLSGSVSSQYLTALLMAAPLALGDVEIEIVDKLISVPYVEMTLKLMERFGVAVEHDGNWDRFLVHGGQKYKSPGNAFVEGDASSASYFLAGAAVTGGTITVKGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDSSSQKVLQGIDVNMNKMPDVAMTLAVVALFANGPTAIRDVASWRVKETERMIAICTELRKVSYLTDILLVFQLGAKVEEGPDYCVITPPEKLNVTAIDTYDDHRMAMAFSLAACGDVPVTIKDPGCTRKTFPDYFEVLEKFTKH* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0906 537 SUPERFAMILY EPT/RTPC-like 86 533 IPR013792 GO:0003824
Apr10g0906 537 PANTHER AROM/DEHYDROQUINATE SYNTHASE 1 537 - -
Apr10g0906 537 Gene3D Enolpyruvate transferase domain 320 535 IPR036968 GO:0016765
Apr10g0906 537 TIGRFAM aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 96 536 IPR006264 GO:0003866|GO:0009073
Apr10g0906 537 Gene3D Enolpyruvate transferase domain 102 314 IPR036968 GO:0016765
Apr10g0906 537 MobiDBLite consensus disorder prediction 15 35 - -
Apr10g0906 537 ProSitePatterns EPSP synthase signature 1. 176 190 IPR023193 -
Apr10g0906 537 Pfam EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 89 531 IPR001986 GO:0016765
Apr10g0906 537 CDD EPSP_synthase 94 534 IPR006264 GO:0003866|GO:0009073
Apr10g0906 537 Hamap 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 92 537 IPR006264 GO:0003866|GO:0009073
Apr10g0906 537 PANTHER 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE, CHLOROPLASTIC 1 537 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0906 K00800 - gmx:100789268 917.916