Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0904 ATGGAGGTGGGTATGCTTCCAATCTCAGCTTCAAAGAGAGGAAAACTCTTAGCTGCTGGTTATACCACACTCGATTCCATTGCTCGTTCCTCACCCACCCACCTTGCTCAAGATATTCAAGTTTCTGAGAGTGAAGCCTCAGAAATTTTGAATTTTGCAACCAAGACTATAGCTTTGGACAGATCAAATGGGACTCACACTGCCGGGGTTGATGGTGGTCAGACTGCTTGGGATATGCTCAATGACGAAAAGTTCTCTTCTCATATTACCACATCTTGTGCAGATCTGGATAACATCCTCAGTGGAGGGATTAAGTGTAAAGAAGTCACTGAAATAGGTGGAGTTCCAGGCATTGGTAAAACGCAAATTGGGATTCAACTTGCAGTAAATGTTCAGATTCCACCGGAATATGGTGGCCTAGGTGGGAAGGCAATATACATTGACACGGAAGGAAGCTTTATGGTTGAACGTGTTCTGCAAATTGCTGAAGCATGCATAGAAGACATGTCGGAATATAGCCACCACTTTCACAAGGATTTTCAAGATCGGGAAGTTAAAATGCACCCTAATAGTATCTTGGAAAATATATTCTATTTTCGTGTTTGCAGCTATACTGAGCAAATTGCTTTGGTAAATTACTTGGACAAATTCATCGCAGAGCATAAAGATGTAAAGATCATCATTGTTGACAGTGTTACTTTCCACTTCCGCCAAGACTTTGATGATATGGCTCTGAGGACTCGATTACTCAGTGAAATGGCTTTGAAGTTGATGAAGCTTGCAAAGAAATTCTGTTTGGCTGTTGTTATGTTGAATCAAGTAACTACCAAGCATATTGAAGGTTCATTTCAATTGACCCTTGCACTGGGTGATAGCTGGTCACATTCATGCACAAACAGGATCATCTTATTTTGGAATGGCAATGAAAGACATGCATATATTGACAAGTCCCCTTCTCTTAAATCAGCATCAGCTCCATATTCTGTGACCACTAGAGGGATCCGTAATTCTACTTCTGGCTGTAAACGAATCAAGATGATGTGA 1044 0.4109 MEVGMLPISASKRGKLLAAGYTTLDSIARSSPTHLAQDIQVSESEASEILNFATKTIALDRSNGTHTAGVDGGQTAWDMLNDEKFSSHITTSCADLDNILSGGIKCKEVTEIGGVPGIGKTQIGIQLAVNVQIPPEYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMSEYSHHFHKDFQDREVKMHPNSILENIFYFRVCSYTEQIALVNYLDKFIAEHKDVKIIIVDSVTFHFRQDFDDMALRTRLLSEMALKLMKLAKKFCLAVVMLNQVTTKHIEGSFQLTLALGDSWSHSCTNRIILFWNGNERHAYIDKSPSLKSASAPYSVTTRGIRNSTSGCKRIKMM* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0904 347 CDD Rad51_DMC1_radA 89 335 IPR033925 GO:0003677
Apr10g0904 347 Gene3D - 69 338 IPR027417 -
Apr10g0904 347 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C 1 347 - -
Apr10g0904 347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 335 IPR027417 -
Apr10g0904 347 PIRSF Rad51 1 339 IPR016467 -
Apr10g0904 347 Pfam Rad51 74 336 IPR013632 -
Apr10g0904 347 Gene3D - 14 67 - -
Apr10g0904 347 ProSiteProfiles RecA family profile 1. 85 274 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Apr10g0904 347 SUPERFAMILY Rad51 N-terminal domain-like 4 56 IPR010995 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0904 Apr-Chr10 21523089 21526243 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0904 K10870 - gmx:100527406 556.599