Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0885 ATGATATTTCTCTTTTCTTCAATTCTTAGAGCTCAAGGTTACACTACAAGAACTCAAATGTTCATTTATGGAGGGTGCTCTCAAGAAAAATACCAACCTAACACACCCTTTGAAGCCAACCTTAATTCTTTTCTGTCTTCAGTTGTTAGCTCATCTTCTCACATTTTATACAATAGCTTTGCAATTGGAAATGGAAGCTCAACAGCCTCAGAAGGGTCCATATATGGCTTGTACCAATGTAGGGGTGATTTAAGACCAATTGATTGCTCAAAATGTGTTCAAAGTTCTGTTAACCAAATAGGTTTGGTTTGTCCCTTGGCCCTTGGAGCATCTTTGCAACTTGAAGGCTGTTATCTAAGATATGAACATGTTGATTTCCTTGGAAAACCTGACACTAGCCTTTGGTTCAAGAAGTGTAGCAAAGCTGTGACAAATGATGTTGAGTTCTTTAGGCGTAGAGATGATGTTCTTGCTGATTTGCAAGTAGCTAATGGATTTGGAGTTAGTACTTCAGGTTTTGTTGAAGGGTTTGCACAGTGTTTGGGGGATTTAACTGTTGCAGATTGCTCTTCTTGCCTTGCAGAAGCAGTGAGAAAGCTGAAGAATATATGTGGATCAGCAGCATCTGCTGATGTGTTCTTGGCACAGTGTTATGCTAGGTATTGGGAATCTGGCTACTATGATGAACCAGAATCTTCCAACGACGATGACCAAGTGGGAAAATCAGTTGCCATTATTGTGGGAGTACTAGCAGGTCTAGCCATTCTAATTGTCCTCCTCTCAATCTGCCGAAGAGCAATGGGTAACATTTGA 813 0.4047 MIFLFSSILRAQGYTTRTQMFIYGGCSQEKYQPNTPFEANLNSFLSSVVSSSSHILYNSFAIGNGSSTASEGSIYGLYQCRGDLRPIDCSKCVQSSVNQIGLVCPLALGASLQLEGCYLRYEHVDFLGKPDTSLWFKKCSKAVTNDVEFFRRRDDVLADLQVANGFGVSTSGFVEGFAQCLGDLTVADCSSCLAEAVRKLKNICGSAASADVFLAQCYARYWESGYYDEPESSNDDDQVGKSVAIIVGVLAGLAILIVLLSICRRAMGNI* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0885 270 Gene3D - 135 224 IPR038408 -
Apr10g0885 270 Gene3D - 18 126 IPR038408 -
Apr10g0885 270 ProSiteProfiles Gnk2-homologous domain profile. 19 126 IPR002902 -
Apr10g0885 270 ProSiteProfiles Gnk2-homologous domain profile. 128 226 IPR002902 -
Apr10g0885 270 Pfam Salt stress response/antifungal 142 221 IPR002902 -
Apr10g0885 270 Pfam Salt stress response/antifungal 26 123 IPR002902 -
Apr10g0885 270 PANTHER PLASMODESMATA-LOCATED PROTEIN 8 2 267 - -
Apr10g0885 270 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 2 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0885 Apr-Chr10 21378822 21380726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0885 3 261 Receptor kinase-like Gene Family AT5G40380 28.788 7.49e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0885 - - aprc:113850986 511.146