Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0883 ATGAGGGATCCGAATTTGGAGTTGCAGGAATCGGGTTGGGAGGAACTGCGAAAGGAAGCGCGCAAGATCGAAGGCGATCTCGACGTCAAGCTTTCTTCTTACGCCAAACTTGGCGCTCGCTTCACTCCAGGAGGTTATGTGGATGGTGGTTCACCACCTCTTGGGTCCAGTAGGTCATGGAAGTCCATGGAAATGGAAATCCAATCCTTGCTTGAGAAACTGTTGGATATAAATGATTCAATGAGTAGATGTGCTGCATCTGCTGGACCAGCCACTTCTGTTACTCAAAAGTTGGCTAGGCACAGAGATATTCTTCATGAGTTTACCCAGGAATTTAGGCGCATCAAGGGAAACATAAACTCAATGAGGGAACATGCAGAGCTTTTGAGTTCTGTCAGGGATGATATTACTGACTTTAAGACGTCTGCTGGTAGTATGTCCCCAAGGATGCAGTTACTACGTGAGAGAGCTGCAATCCATGGCAATATATCTCATATAGATGATGTGATTAGTCAAGCTCAAGCAACAAGAGCTGTGTTGGGTTCGCAGAGGGCATTGTTTTCTGATGTTCAAGGAAAAGTGAAGCTTCTTGGTGACAAGTTTCCCATCATTCGTAGCCTGCTTGGTTCAATAAGAAGGCGACGCTCAAGGGATACTCTTATTCTGTCAGCAGTTATTGCTGCTTGTACGTTGTTTCTCATTATTTATTGGCTCTCAAAGTAA 723 0.4495 MRDPNLELQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTPGGYVDGGSPPLGSSRSWKSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSMREHAELLSSVRDDITDFKTSAGSMSPRMQLLRERAAIHGNISHIDDVISQAQATRAVLGSQRALFSDVQGKVKLLGDKFPIIRSLLGSIRRRRSRDTLILSAVIAACTLFLIIYWLSK* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0883 240 PANTHER GOS-28 SNARE- RELATED 4 240 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Apr10g0883 240 Pfam Snare region anchored in the vesicle membrane C-terminus 151 215 - -
Apr10g0883 240 PANTHER GOLGI SNAP RECEPTOR COMPLEX MEMBER 1-2 4 240 - -
Apr10g0883 240 PIRSF Golgi_SNARE 7 239 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0883 Apr-Chr10 21355987 21363076 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0883 K08495 - gmx:100781813 424.476