Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0874 ATGGCGAAACGCGACACATCAGATTCCGAGTCCGAGGAAGGCTCCTCAAGTTCAGCGTCAGACTCGGAAACCATGGCCAATGCGAAGGGCGTTTCAGAGTACGAGAAACAGAGGATGTCCAGAATTGCTGAGAACAGAGCCAGATTGGAGGCTTTGGGTTTGCCCCAAATCGCTTCCTCCCTCAAGGGTTCGCCTCAGACCAACCAAAAGGGTAAAGAAAAGGTTCAAAATGATGATGATGAAGAGTACGTACCCGAAGACGATGGAGAATTCGCTTCAGGTTTTTCAAGTGAAGAAGATGACAACCATAAAGATGAAGACTTTGCAGTTGAAAATGCTTCTGGGTCACGGAAAAGGAAGGTAAAGAACAAAGGTTTGAAAACAAAAGGTAGAGTTTCTGGGAAGAAGCATGTCAATAATTCAGAGAACATTGATGATGATGATGAAGCTTTGAGGCAGGCAATTGCTCTTTCCCTGCAAGACTCCAAGAATGTAGTGAACATTAGCAAGACTGAGAAAAAGGGAAGCAATCACATTCAAGAAGATAAGGGAAGAAAGAAGAACAAAAAACCGTTTTCGAGTCGGCTGCAAATGACCGAGGATGAGCTCATTGTTCACTTCTTCCAGCTTGATGAAGCGGGAAAAGGAACTATAACAATAAGGGATCTACAAAGGGCAGCTACGGCTCACGACTTTTTATGGACAGACAAAGAGTTGGTTGATATGATTCGCTGCTTTGATAGTGATGGAGATGGAAAGCTAAGCCTTGATGATTTCCGGAAGATTGTTGTTCGTTGCAACTTGATTAAGGACTAA 816 0.4375 MAKRDTSDSESEEGSSSSASDSETMANAKGVSEYEKQRMSRIAENRARLEALGLPQIASSLKGSPQTNQKGKEKVQNDDDEEYVPEDDGEFASGFSSEEDDNHKDEDFAVENASGSRKRKVKNKGLKTKGRVSGKKHVNNSENIDDDDEALRQAIALSLQDSKNVVNISKTEKKGSNHIQEDKGRKKNKKPFSSRLQMTEDELIVHFFQLDEAGKGTITIRDLQRAATAHDFLWTDKELVDMIRCFDSDGDGKLSLDDFRKIVVRCNLIKD* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0874 271 SMART efh_1 238 266 IPR002048 GO:0005509
Apr10g0874 271 SMART efh_1 202 230 IPR002048 GO:0005509
Apr10g0874 271 ProSitePatterns EF-hand calcium-binding domain. 247 259 IPR018247 -
Apr10g0874 271 CDD EFh 210 263 IPR002048 GO:0005509
Apr10g0874 271 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 146 165 IPR003903 -
Apr10g0874 271 MobiDBLite consensus disorder prediction 1 42 - -
Apr10g0874 271 ProSiteProfiles EF-hand calcium-binding domain profile. 234 269 IPR002048 GO:0005509
Apr10g0874 271 Gene3D - 152 269 - -
Apr10g0874 271 SUPERFAMILY EF-hand 198 266 IPR011992 -
Apr10g0874 271 MobiDBLite consensus disorder prediction 12 27 - -
Apr10g0874 271 MobiDBLite consensus disorder prediction 96 118 - -
Apr10g0874 271 MobiDBLite consensus disorder prediction 80 95 - -
Apr10g0874 271 MobiDBLite consensus disorder prediction 168 193 - -
Apr10g0874 271 Pfam EF-hand domain pair 202 263 IPR002048 GO:0005509
Apr10g0874 271 MobiDBLite consensus disorder prediction 174 193 - -
Apr10g0874 271 MobiDBLite consensus disorder prediction 56 145 - -
Apr10g0874 271 MobiDBLite consensus disorder prediction 119 134 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0874 31 270 EF-hand Containing Proteins AT1G73440 42.739 2.33e-55 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0874 - - gmx:100806103 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0874 10 21156396 21159923 Apr10g0874 10 21156396 21159923 ECH