Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0870 ATGAAGTTTGGAAAGAGACTGAAGCAACAAATTCAGGAGACCCTGCCGGAGTGGAGGGACAAGTACTTGTCTTACAAGGAATTGAAGAAGCTCCTGCGGCTGATATCGGCGGCGCCGCCGATGCTTAATGACTCTTTGGAGTATGGCAAGACGGAGGCTGAGTTTATGTACTTGTTGAACAATGAGATAGACAAGTTCAATGGGTTCTTCATGGAGAAAGAGGAAGATTTCATTATCCGTCATAAGGAAGTACAACATAGAATAAAGAGAGTAGTTGATTTATGGGGACCAAATGGTAGTCAACCTTCCGAAGCAGATTATAAGGAGGAGATGGCAAAAATCAGAAAAGCTATTGTTGATTTCCATGGTGAAATGGTTCTCTTAGTAAACTACAGCAACATTAATTATACAGGGTTGGCTAAAATTCTGAAGAAATATGATAAGAGAACAGGAGGGCTTCTGCGTTTGCCATTCATTCAGAAAGTACTGGAACAACCCTTTTTTACAACAGATTTAATTTCAAAACTTGTGAAGGAATGTGAAAGCATAATTGATGCAGTGTTCCCAGCTGAGGAAGAAGCTGAAAGGGCAAAGGAAGCAACAGAAGCCATTATAGTGGCTGGAGAAGGGATTTTCAGAAACACAGTTGCAGCTTTACTTACAATGCAAGAGATCAGAAATGGTAGCTCCACACAAAGTCCCTTTTCTCTGCCTCCTCTCAACTTGCCAGACTCTGATCTCATACAATCAATACAACTCAATGCTGCTGTTCCCATTGTCTAG 783 0.4138 MKFGKRLKQQIQETLPEWRDKYLSYKELKKLLRLISAAPPMLNDSLEYGKTEAEFMYLLNNEIDKFNGFFMEKEEDFIIRHKEVQHRIKRVVDLWGPNGSQPSEADYKEEMAKIRKAIVDFHGEMVLLVNYSNINYTGLAKILKKYDKRTGGLLRLPFIQKVLEQPFFTTDLISKLVKECESIIDAVFPAEEEAERAKEATEAIIVAGEGIFRNTVAALLTMQEIRNGSSTQSPFSLPPLNLPDSDLIQSIQLNAAVPIV* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0870 260 Pfam SPX domain 102 161 IPR004331 -
Apr10g0870 260 Pfam SPX domain 1 37 IPR004331 -
Apr10g0870 260 ProSiteProfiles SPX domain profile. 1 160 IPR004331 -
Apr10g0870 260 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 258 IPR031142 GO:0016036
Apr10g0870 260 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 258 - -
Apr10g0870 260 CDD SPX_AtSPX1_like 2 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0870 Apr-Chr10 21121361 21124368 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0870 - - gmx:100778590 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0870 10 21121361 21124368 Apr10g0870 10 21121361 21124368 ECH