Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0868 ATGTGGACGCAGCAAGTGCTGCCTCTACCAAGCCAGAAAGTGTTGCTGTGTTGTTCATCTTCAAAAAACTCATGTTTTGTGAGGACCCATAATAGCAAAAAGGGTTATGGAAGAGTAAAGGCATTAACTTTGGAAGAACTTCCCCCAAACGCGCTTCGCAGGAAGAGAGAACCACATTGGAGAGGAGGCTTCAGCCTTGGACTCGACTTGGGTTTGGCTCGCACTGGCCTTGCCCTAAGCAAAGGCTTCTCTATTCGCCCTTTAACCGTTTTGGAACTGCGAGGACAGAAGCTTGAGGTTCAGATTATTAACATTGCTGAACAAGAGGAGGCTGACGAGTTTATAATTGGACTTCCAAAATCTTTTGATGGAAAGGAAACGCCTCAGTCAAACAAAGTCCGAAGTGTTGCAGGAAGGCTTGCTGTTTGTGCAGCTGAGAGGGGTTGGAGAGTATATCTACAGGATGAACATGGGACAACAACAGAAGCTGTAGATCGAATGATCAACATGGGTTTAGGTAAGTCCTCTCAGCAGAAGAAGCTTGACGCCTATGCCGCCATGATGGTACTGGAGAGATATTTCTCCACATCAGGTCAAGGTACTGAACTTGTTTTGCCCAAGAATCAAGAATTACAAGCAAAGCTTCAAAGGGGTCCTCCCAAAGATGTTGATTTTTTCTCGGATGAAGATTAA 693 0.4531 MWTQQVLPLPSQKVLLCCSSSKNSCFVRTHNSKKGYGRVKALTLEELPPNALRRKREPHWRGGFSLGLDLGLARTGLALSKGFSIRPLTVLELRGQKLEVQIINIAEQEEADEFIIGLPKSFDGKETPQSNKVRSVAGRLAVCAAERGWRVYLQDEHGTTTEAVDRMINMGLGKSSQQKKLDAYAAMMVLERYFSTSGQGTELVLPKNQELQAKLQRGPPKDVDFFSDED* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0868 230 Pfam Holliday junction resolvase 65 195 IPR005227 GO:0006364
Apr10g0868 230 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 24 229 IPR005227 GO:0006364
Apr10g0868 230 SUPERFAMILY Ribonuclease H-like 64 196 IPR012337 -
Apr10g0868 230 TIGRFAM RNAse_H_YqgF: putative transcription antitermination factor YqgF 66 194 IPR005227 GO:0006364
Apr10g0868 230 SMART rnase_8s 63 163 IPR006641 GO:0006139
Apr10g0868 230 CDD YqgF 66 194 IPR005227 GO:0006364
Apr10g0868 230 Gene3D - 65 202 IPR037027 GO:0006139
Apr10g0868 230 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 24 229 - -
Apr10g0868 230 Hamap Putative pre-16S rRNA nuclease [yqgF]. 63 198 IPR005227 GO:0006364
Apr10g0868 230 MobiDBLite consensus disorder prediction 211 230 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0868 - - gmx:100810356 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0868 10 21068435 21072032 Apr10g0868 10 21068435 21072032 ECH