Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0867 ATGGATTATTCAGGCTACAACTTTCACCACCACCAGCAGCAACAACAACAACAACAACCCTATGGCTACGACCCATCTCAGATCCAATACGATCAATCCTATGCTGCATACCAACAATATTACGCTTACAATCCCCAATACGCATATTATCCCAATACCCATCAACCCCAATTCCATTACCAGCCCCAATCCCCACCACTTCACCCTCCTGGCGTTAATCCAACCGCTCCTGAACCCTCCTCGATTGGGCCATCTCAATTCAGAGGTAGGGGTGGCAAGGGGGGTAGACCATTTAGAGGGGGTGTCCGTGGTCGAGGTCATGGAGTGGGTGGTGGTAGACACATTCCAACAAATTCCTTCGGACCTGCTATTTCTAAATCTACTGCTGCTGGGGCTACTTCAGTGGTAGAACCGTCATCATCAGTCTCTGCACAAACACCATTGCCTAAAGCAGCTCAAGTGTCAGCAGCACCCCGAAAAGCATGTTGTGAAATTTGTAAGGTTGAGTGCAATAGTCCAGAAATCTTGGAGCAACACAAGAATGGGAAGAAACATAAGAAGAATATGAAAATGCATGAGCAATTACAAAGACGCAACACTATAAATGGACAACAGAGTGGGCAACTTCGTACCTCTGAATTGATTTTAACAGATCAACCTAAGGAAGTTCAGGAATCAAAGAATAATGGATGCCCCTCAGAAAATATGGGCTCTCAGGTTATAGTTGATCATCACAAGGAGGAAATACAGATGCAGAATAATGCAGGAAACATTTCTGAAGTTCCAGCTGAAGTGACTGAGGGGAAAACCCTGGAAAGCTCTGCTGCAGGAGGCCGAGGATTGAAGCGGAAGAAGAAAGGAGGGAAGGGGGGTAAATACATGAAAACTAATGATGGTTCAAGGCCAGTGGAACTTCCAAAACCTGCACAACCTGTGTCTTTTAGATGCGAGATGTGTGATGTTAAATGTGAGTCACAAGTTGTTTACCAGAGTCATGTGACTGGGAAAAAGCACTTATCAAGACTAAAGCGTGCCCATAGTCACCAAGCTTCAGCTGTTGTAGGTCAGCAAACTTTGTCTGGAGGAATGGCTGGGCTTCAAGCACTTTACCCACCTGACATCAATGCTTTGTCTAATGCAATTAACGCTCAAGTCCAACAAGGTGACAATGATCCACAGCTACTTTTGGCTCAGCTACTGATGACTGTACTATCTCAAGCTCAAGTTCCAGCAACAGCACATCCTACCAGAGACACAAAACCTGAGCTTTTACCTGTTCAAGGTTCAAGTGTGGCCATACAAATTGAAGGTGGAAATTCTAAAGTTGAACAACAGGTGCTAAAACATCCCCCAGATAATTCAGATGTCACGCCCACAGCCAATTTAAGTGCAGCAAATGACCAAATACCTTCAGCAAAATGTGAAGCTCCCACCTTTTAG 1440 0.45 MDYSGYNFHHHQQQQQQQQPYGYDPSQIQYDQSYAAYQQYYAYNPQYAYYPNTHQPQFHYQPQSPPLHPPGVNPTAPEPSSIGPSQFRGRGGKGGRPFRGGVRGRGHGVGGGRHIPTNSFGPAISKSTAAGATSVVEPSSSVSAQTPLPKAAQVSAAPRKACCEICKVECNSPEILEQHKNGKKHKKNMKMHEQLQRRNTINGQQSGQLRTSELILTDQPKEVQESKNNGCPSENMGSQVIVDHHKEEIQMQNNAGNISEVPAEVTEGKTLESSAAGGRGLKRKKKGGKGGKYMKTNDGSRPVELPKPAQPVSFRCEMCDVKCESQVVYQSHVTGKKHLSRLKRAHSHQASAVVGQQTLSGGMAGLQALYPPDINALSNAINAQVQQGDNDPQLLLAQLLMTVLSQAQVPATAHPTRDTKPELLPVQGSSVAIQIEGGNSKVEQQVLKHPPDNSDVTPTANLSAANDQIPSAKCEAPTF* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0867 479 MobiDBLite consensus disorder prediction 62 77 - -
Apr10g0867 479 SMART ZnF_U1_5 158 192 IPR003604 GO:0003676|GO:0008270
Apr10g0867 479 SMART ZnF_U1_5 313 345 IPR003604 GO:0003676|GO:0008270
Apr10g0867 479 MobiDBLite consensus disorder prediction 7 27 - -
Apr10g0867 479 PANTHER OS06G0651300 PROTEIN-RELATED 79 447 - -
Apr10g0867 479 SUPERFAMILY beta-sandwich domain of Sec23/24 9 86 - -
Apr10g0867 479 SMART c2h2final6 161 185 IPR013087 -
Apr10g0867 479 SMART c2h2final6 314 338 IPR013087 -
Apr10g0867 479 SUPERFAMILY beta-beta-alpha zinc fingers 157 196 IPR036236 -
Apr10g0867 479 SUPERFAMILY beta-beta-alpha zinc fingers 311 344 IPR036236 -
Apr10g0867 479 MobiDBLite consensus disorder prediction 53 120 - -
Apr10g0867 479 Pfam Zinc-finger of C2H2 type 163 185 - -
Apr10g0867 479 Pfam Zinc-finger of C2H2 type 314 338 - -
Apr10g0867 479 Gene3D Classic Zinc Finger 292 345 - -
Apr10g0867 479 Gene3D Classic Zinc Finger 145 194 - -
Apr10g0867 479 MobiDBLite consensus disorder prediction 1 27 - -
Apr10g0867 479 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 79 447 - -
Apr10g0867 479 MobiDBLite consensus disorder prediction 268 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0867 Apr-Chr10 21062544 21067147 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0867 - - gmx:100794880 486.878