Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0861 ATGGCTTTAGGTGGAACAGCTCCCCCAAGAGGAAGTGCAGCCGCAACTGCAAGCATGAGGAGGAGGAGAACAACCGGTGGTGGGGCCTCTGGAGGAGCAGCTGGAACTATGCTTCAATTTTACACTGATGACGCCCCTGGACTCAAGATCTCCCCTAATGTGGTTCTTGTAATGAGCATTGGCTTTATAGCATTTGTTGCCATCCTTCATGTGATGGGCAAGCTGTATTTTGTGCGTAAGGACTGA 246 0.5041 MALGGTAPPRGSAAATASMRRRRTTGGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRKD* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0861 81 MobiDBLite consensus disorder prediction 1 32 - -
Apr10g0861 81 PIRSF Sec61_beta 2 80 IPR030671 GO:0005784|GO:0006886
Apr10g0861 81 Pfam Sec61beta family 34 73 IPR016482 -
Apr10g0861 81 PANTHER SEC61 SUBUNIT BETA 1 81 IPR030671 GO:0005784|GO:0006886
Apr10g0861 81 PANTHER PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0861 Apr-Chr10 20956915 20958335 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0861 K09481 - qsu:111994397 120.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0861 10 20956915 20958335 Apr10g0861 10 20956915 20958335 ECH