Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0856 ATGCAAATCAACTCTCTATCACTCCCCTCATGCCGTATCACCACTCTGCTAAAGGACTCTGCCACCCCACCTCCACATCAACCAAACAAGGTGGTCTGGCAGGGGAATGAAAAGTGTGTAGATTGCTCTTCATTGATTGGAAACTATAGCAAGAAAAGAATGTTTCATCAATCCGATGGTGTTTTTCAGGATATGAAAGTGGATGGTTACATGCCCAAACAATCTACTTTGTGTGTGTTGATGCTATATTATACAGAGAATGGTCTCTTTCCTCAAGCACAGACTATATGGGAGCAGCTCCTCAATAGTTCTTTTGTGCCTCCAGTTAGATTCATTTCAAAATTATTTGATGCTTATGGAAAACATAGGAGATTTGATGAAGTGATCAATGTTCTACATGATATGGATATGAGGAATTTGAGTATATTACCTGATGTGTACTCATTGGCTATCTCTTGTTTTGGAAGAGAAGGACAGCTTGAATTGATGGAAGAAACGGCAAAGGAGATGGTTGCTAGAGGTTTGAAAATGTGTTCTAGAACTGCTAATGCTTTCCTTTTGTATTATAGTATTTTTGGTTCTTTGAAAGAGATGGAGAATGCATATGGCCGCCTTAAGAAATCTAGATTTCTGATAATGGAGGAAGTGATTCGAGCCATGGCCTCTGCATATATAAAGGAGAGAAAATTCTATGAGTTGGGTGAGTTCCTAAGAGATGTGGGTCTAGGTAGGAAAAATGTTGGAAACCTTTTATGGAATCTTATGCTACTTTCTTATGCTGCCAATTTCAAAATGAAAAGCATGCAGAAAGAATTTATTACAATGGTGGAATCTGGGTTCCGTCCTGATCTTACAACCTTTAATATCCGTGCTCTTGCCTTTTCTAGGATGTCTCTATTCTGGGACCTCCACCTTAGCATTGAACATATGAAGCATGAAAGGGTCATTCCTGATCTAGTGACTTTTGGGTGTGTTGTTGATGCATACTTGGATAGAAGGCTTGGAAGAAACTTGGATTTTGCTCTAAACAAAATGAACTTGGATGATTCTCCAGAATTGTTAACAGATCCTTTTGTGTATGAGGCCTTAGGTAAAGGGGACTTCCACATGAGTTCAGAAGCATTTTTTGAGTTCAAAACACAAAGGCAATGGACTTACCGGGTTTTGATACAAAAATATCTCAAGAAACATTATCGAAGGAACCAAATATTTTGGAACTATTAA 1224 0.3848 MQINSLSLPSCRITTLLKDSATPPPHQPNKVVWQGNEKCVDCSSLIGNYSKKRMFHQSDGVFQDMKVDGYMPKQSTLCVLMLYYTENGLFPQAQTIWEQLLNSSFVPPVRFISKLFDAYGKHRRFDEVINVLHDMDMRNLSILPDVYSLAISCFGREGQLELMEETAKEMVARGLKMCSRTANAFLLYYSIFGSLKEMENAYGRLKKSRFLIMEEVIRAMASAYIKERKFYELGEFLRDVGLGRKNVGNLLWNLMLLSYAANFKMKSMQKEFITMVESGFRPDLTTFNIRALAFSRMSLFWDLHLSIEHMKHERVIPDLVTFGCVVDAYLDRRLGRNLDFALNKMNLDDSPELLTDPFVYEALGKGDFHMSSEAFFEFKTQRQWTYRVLIQKYLKKHYRRNQIFWNY* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0856 407 Gene3D Tetratricopeptide repeat domain 247 347 IPR011990 GO:0005515
Apr10g0856 407 Gene3D Tetratricopeptide repeat domain 39 246 IPR011990 GO:0005515
Apr10g0856 407 TIGRFAM PPR: pentatricopeptide repeat domain 114 142 IPR002885 -
Apr10g0856 407 TIGRFAM PPR: pentatricopeptide repeat domain 146 176 IPR002885 -
Apr10g0856 407 Pfam PPR repeat 146 175 IPR002885 -
Apr10g0856 407 Pfam PPR repeat 115 139 IPR002885 -
Apr10g0856 407 Pfam PPR repeat 42 69 IPR002885 -
Apr10g0856 407 PANTHER OS08G0520200 PROTEIN 35 407 - -
Apr10g0856 407 PANTHER OS08G0520200 PROTEIN 35 407 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0856 43 396 Glycosyltransferase AT1G05670 22.039 9.84e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0856 - - gmx:100818684 671.003