Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0851 ATGGCTGGGCTAAAGTTTGCTTGCGTGGTTGCGATTATGTGCATGGTGGTAGTGAGCGCACCCATGGCAGAGGCAACAATCACATGCGGTCAAGTGACGTCAGCCCTAAGTTCATGCATACCTTACATTCAGAAAGGCGGAGTACCGTCCAAACCCTGCTGCAGCGGAGTGAGTCAACTGAATAACGCTGCCAAGACCACCGCCGACCGCCAGGCCGCATGCAACTGTTTGAAAAACGCTGCAAAGGGTCTTGGGAATAATTTCAATGCCAACAACGCTGCTTCTCTCCCAGGCAAATGTGGCGTTAGCATCCCCTACAAGATCAGCACCACCACTAACTGCGCCACCATCAAGTTCTGA 360 0.525 MAGLKFACVVAIMCMVVVSAPMAEATITCGQVTSALSSCIPYIQKGGVPSKPCCSGVSQLNNAAKTTADRQAACNCLKNAAKGLGNNFNANNAASLPGKCGVSIPYKISTTTNCATIKF* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0851 119 PRINTS Plant phospholipid transfer protein signature 28 44 IPR000528 GO:0006869|GO:0008289
Apr10g0851 119 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Apr10g0851 119 PRINTS Plant phospholipid transfer protein signature 69 84 IPR000528 GO:0006869|GO:0008289
Apr10g0851 119 PRINTS Plant phospholipid transfer protein signature 87 104 IPR000528 GO:0006869|GO:0008289
Apr10g0851 119 PRINTS Plant phospholipid transfer protein signature 105 116 IPR000528 GO:0006869|GO:0008289
Apr10g0851 119 ProSitePatterns Plant lipid transfer proteins signature. 96 117 IPR000528 GO:0006869|GO:0008289
Apr10g0851 119 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 116 - -
Apr10g0851 119 SMART aai_6 29 114 IPR016140 -
Apr10g0851 119 CDD nsLTP1 27 114 - -
Apr10g0851 119 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 116 IPR036312 -
Apr10g0851 119 Gene3D - 26 119 IPR036312 -
Apr10g0851 119 PANTHER - 1 116 IPR000528 GO:0006869|GO:0008289
Apr10g0851 119 Pfam Protease inhibitor/seed storage/LTP family 29 114 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0851 Apr-Chr10 20861696 20862568 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0851 1 118 Acyl Lipid Metabolism Gene Families AT2G38540 52.101 5.42e-37 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0851 - - gmx:100306510 163.696