Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0849 ATGGGGGAGCATGTAGCAGCGTTGCACACTGCTACAAACGCTTTGCAAGCATTAGGGAGGGGTTTTGATGTGAACTTCGATACGAGGTTGCTTTATTGTAAAGGAGTTTCAGGGTCTAGGGTAGTTGAGATTGATGAAGAACACCACAGGAACCTGTGTTTGCATGATGATGTGGTTGTTCCCACCGTTTCCTGGGACATTGGAAGCTTTCCGGAGCCCGTGCTGCGTCAGAGTTCTGGAGTCCGAAGTTTCCAAGAGGTGAATTTCACGATGGTGGACTACTTTAACGAAAGGGCAAATATCTCAGGGAGCTTTCCTCTTGGGAGCTTTAACTCTGCATTTAGCTTTACTGGTTCAAAAGATGTTGATGCTGCAGCCACAAAAACCTTGTCTTCAGATGGGTTTTATATTCCCCTCGCAAAGGTTCAGCTTAAAAAATCCCGCTTGATCTTGCAAGAAAATGTCAAAAAGGCTGTACCAGTCAATTGGGACCCACTGTCCTTGGCAAGTTTTATTGAAAATTTTGGGACACATGTCATTACGTCAATAACTATTGGTGGTAAAGATGTTATTTATGTTAAACAACACCATACTTCTCCTTTGTCAAAGTTGGAGATTAAAAACTATATTGAGGATATTGGAAATCAGAGGTTCTCGGACATCAATAGCCATACAAGTTCAGGTCAAACAAAGTCCAAGGATAAGGGTGTTGATCCCTTTTCATTCAATAGTCAAGGGATTTACCCTCAACCCACGAGTGCAACATATCCTACTGGGAAAGAGGATGTCACAGTCATTTTTAGAAGAAGAGGAGGAGATGATTTGGAACAAAATCACAGTAAATGGTTAAAAACCATCAAGTCCTCCCCGGATATTATTGAGATGACTTTCTGTCCTATAACTGATCTGCTTGATGAAATACCTGGCAAGGAGCATTTGACTCGGGCCATTGGTCTTTATCTTGAATATAAACCACCAATTGAAGAACTTAGGTATTTTCTAGAGTTTCAAATTCCTCGTGTTTGGGCTCCTTTACAGGACAGGATTCCTGGTCAACAAAGGAAGGAACCTGTGTGCCCATCTTTACAATTCAGCATAATGGGCCAGAAACTTTATGTCAGTCAAGAACAGATTACAGTTGGACGTAGGCCAGTAACTGGCTTACGCCTTTGTCTAGAGGGAAGCAAGCAGAATCGGCTTAGTGTTCATGTTCAACACTTGGTATCCCTTCCAAAGATTCTTCATCCATATTGGGACAGCCATGTAGCCATTGGTGCTCCCAAGTGGCAGGGACCGGAGGAACAAGACAGCCGGTGGTTTGAGCCTGTTAAGTGGAAGAATTTTTCTCATGTGAGCACTGCACCAATTGAGAACCCTGAAACCTTCATAGGAGACTTCTCTGGTGTTTACATAGTTACTGGAGCACAGCTTGGAGTGTGGGATTTTGGATCACGGAATGTTTTGTACATGAAGCTCTTGTATTCAAGGTTACCCGGCTGCACGATTCGAAGATCACTGTGGGATCAAATCCCAAGCAAGTCACAAAAAACTCTGAATCCTGGAAACACTTCCAACCCAGATAACTTCACCCTTGGTTCTAGAGAAAACAACACCTCAGGGAACAAGTTGGTGAAGTATGTTGATTTGTCTGAGATGATCAAAGGACCCCAAGATCCTCCTGGCCATTGGTTAGTTACTGGTGGAAAGCTTGGGGTTGAAAAAGGGAAAATTGTTTTGAGAGTGAAATATTCATTGCTTAATTACTGA 1767 0.429 MGEHVAALHTATNALQALGRGFDVNFDTRLLYCKGVSGSRVVEIDEEHHRNLCLHDDVVVPTVSWDIGSFPEPVLRQSSGVRSFQEVNFTMVDYFNERANISGSFPLGSFNSAFSFTGSKDVDAAATKTLSSDGFYIPLAKVQLKKSRLILQENVKKAVPVNWDPLSLASFIENFGTHVITSITIGGKDVIYVKQHHTSPLSKLEIKNYIEDIGNQRFSDINSHTSSGQTKSKDKGVDPFSFNSQGIYPQPTSATYPTGKEDVTVIFRRRGGDDLEQNHSKWLKTIKSSPDIIEMTFCPITDLLDEIPGKEHLTRAIGLYLEYKPPIEELRYFLEFQIPRVWAPLQDRIPGQQRKEPVCPSLQFSIMGQKLYVSQEQITVGRRPVTGLRLCLEGSKQNRLSVHVQHLVSLPKILHPYWDSHVAIGAPKWQGPEEQDSRWFEPVKWKNFSHVSTAPIENPETFIGDFSGVYIVTGAQLGVWDFGSRNVLYMKLLYSRLPGCTIRRSLWDQIPSKSQKTLNPGNTSNPDNFTLGSRENNTSGNKLVKYVDLSEMIKGPQDPPGHWLVTGGKLGVEKGKIVLRVKYSLLNY* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0849 588 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 334 IPR020864 -
Apr10g0849 588 SMART MACPF_8 127 322 IPR020864 -
Apr10g0849 588 MobiDBLite consensus disorder prediction 513 536 - -
Apr10g0849 588 Pfam MAC/Perforin domain 108 320 IPR020864 -
Apr10g0849 588 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 6 588 IPR044663 GO:0006952|GO:0012501|GO:2000031
Apr10g0849 588 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1-LIKE 6 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0849 Apr-Chr10 20827893 20834333 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0849 - - aprc:113849343 1204.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0849 10 20827893 20834333 Apr10g0849 10 20827893 20834333 ECH