Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0840 ATGAAAGTTGCGGATACGGCGGTGAACCGGTCCGAACCGGTGAAGATGGAAGGGTTCAGAGCGGAGATTGATACTTCGGCGCCGTTTGAATCGGTTAAAGAAGCCGTAACCCGATTCGGTGGTATTGGTTATTGGAAACCCATTCTTCACAATCTTACTAATAAGCACTTCGCTCCTCAGCAGCATCTCGCAGAAGTGGTCGATGCTGGAAAACTAGAGGAGCAAGCAGCTGGATTGGAGAAAGAGCTGATCCTTAAAGAAAGGGAAACTCTTGATGTCTTGAAAGAATTGGAAAGTACCAAAAGGCTTGTGGAAAATTTGAAATCAAAGCTACAAAAAGAAGAATCTGATGCAAATTTAAATTTTCAGACGAGTGGGTGTGACAATATATTGTCTAATAAGGAGAATGAGAAAGAAGATAAGGAAAACCAAGGGAGTAGTGTCCTTCAGCATTCAAAGGAGGGTTGTGTTTCCTATCCTTCATCGTCCCCGGGTTTAATATTAATGGAATTGAAGCAGGCAAAATTGAATCTGAACAGAACTACAAGTGATATTGCTGACGTTCGAGCTTCTGTTGAATTGCTCAATAAGAAGTTGGAGAAGGAAAGGATCTCGCTTGAGAAAACCCGTGAGAGGTTAACTCAGAATTCTTCAAAAATATGTTCTCTTGAGGAGGAGCTAAACCAAACAAAACTAAAACTGCAAGTGGCAAAAGATGCTGGAAGTAATGGTGGTTCAGATGATACTTCCGATATTACAAGAGAGCTCCAGCGTCTGAGTTCCGAGACAGAGCATTTCAGAAAAATGGGAGAGGCTGCTAAATCAGAAGTCTTAAAAGCAATGTCTGAGATTGAACAGACAAAGGCTATGATAAACACTGCTGAAATCAGGTTGGTCGCTGCCCGAAAAATGAAGGAAGCTGCAAGAGCAGCAGAAGCTGCTGCCCTTGCAGAGATTAAAGCATTGTCTCATCCCGAGACTTCACCTGGAGATTGTATGCAAAATCACGATGAAGTTACCCTTTCCTTCGAAGAGTATACTGCGCTAACCTGCAAAGCTCGAGAGGCAGAAGAACAATCTAAGAAGAGAGTTGTTGATGCTATGCTTCTAGTGGATGAAGCAAACATATCAAAAATGGACATTTTGAAAAGGGTAGAGGAAGCTACAGAAGAAGTTAAAACCAGCAAGAAGGCCCTTGAAGAAGCTCTAGAAAGGGTAGAGGCTGCAAATAGAGGAAAGCTAGCAGTTGAAGAGGCTTTAAGGAAGTGGCGGTCTGAGGGTCAAAAACGACGTTCCTCTATACATAACCATACCAAGTTTAAAAATGCTTACCCTTCTCACCATCGTAGAGATTCTCGGTTACTTGATGTAAATGGGTTGGATCTTGTAAATAATGAAGTCAAGCCGGATCTGAAGCCAACCCTATCAATAGGTCAAATATTAAGCAGGAAGTTGATGATCCCAGAAGAGTATGAAGTTGAGATGCTTAGAGAAAGAAGCTCCATGAAACGGAAGGTGTCACTGGGTCAGATGCTTGGCAAACAAAACAATGATCCATCCTTTGACAGGCAAGCTGAGAAAGAAAATGGTCAGAAGCCGTTTTCTGCAAAGAGAAAGAAATTCGGATTTGCCCGATTCTCCCTTCTTTTGACAAAACAGCAAAAGAAGAAGAAGCCAACACTGAACTTAAGGTGA 1695 0.4224 MKVADTAVNRSEPVKMEGFRAEIDTSAPFESVKEAVTRFGGIGYWKPILHNLTNKHFAPQQHLAEVVDAGKLEEQAAGLEKELILKERETLDVLKELESTKRLVENLKSKLQKEESDANLNFQTSGCDNILSNKENEKEDKENQGSSVLQHSKEGCVSYPSSSPGLILMELKQAKLNLNRTTSDIADVRASVELLNKKLEKERISLEKTRERLTQNSSKICSLEEELNQTKLKLQVAKDAGSNGGSDDTSDITRELQRLSSETEHFRKMGEAAKSEVLKAMSEIEQTKAMINTAEIRLVAARKMKEAARAAEAAALAEIKALSHPETSPGDCMQNHDEVTLSFEEYTALTCKAREAEEQSKKRVVDAMLLVDEANISKMDILKRVEEATEEVKTSKKALEEALERVEAANRGKLAVEEALRKWRSEGQKRRSSIHNHTKFKNAYPSHHRRDSRLLDVNGLDLVNNEVKPDLKPTLSIGQILSRKLMIPEEYEVEMLRERSSMKRKVSLGQMLGKQNNDPSFDRQAEKENGQKPFSAKRKKFGFARFSLLLTKQQKKKKPTLNLR* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0840 564 Coils Coil 94 117 - -
Apr10g0840 564 Coils Coil 69 89 - -
Apr10g0840 564 Pfam Weak chloroplast movement under blue light 21 119 IPR008545 -
Apr10g0840 564 Pfam Weak chloroplast movement under blue light 169 430 IPR008545 -
Apr10g0840 564 PANTHER MYOSIN HEAVY CHAIN-LIKE 11 558 - -
Apr10g0840 564 Gene3D - 167 324 - -
Apr10g0840 564 MobiDBLite consensus disorder prediction 520 535 - -
Apr10g0840 564 Coils Coil 189 216 - -
Apr10g0840 564 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 11 558 - -
Apr10g0840 564 Coils Coil 371 419 - -
Apr10g0840 564 MobiDBLite consensus disorder prediction 508 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0840 Apr-Chr10 20654122 20656927 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0840 - - gmx:100783770 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0840 10 20654122 20656927 Apr10g0840 10 20654122 20656927 ECH
Apr4g2121 4 30222320 30225546 Apr10g0840 10 20654122 20656927 PCT