Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0838 ATGTGGAGGAACATCAATGGAAGATTTGCCACAAGATTTTTATCCACTTCTTCTTCAACCCGTGGTTGGTGGGACCATGTGAGAACAGCACCAAAGGACCCCATTGTCAGTGTGAACAAGGCCTTTCTTGATGACCCTTTTCCCCACAAGATCAATCTTGGAATGGGAACTTACAGGGATGATGATGGCAAACCCTTCATTCCTCAATGCGTTCGTGACGCAGAAGCAAAGATTCAGCGATGTAAATTCGAGGAATCAAGCACTTCTGCAGTCAGTTCAAAATTTGTTCAGGAGTGTGTAAAGCTGGCATATGGAAATGATTCATATGTTGTCAGAAAAGGATTGTTTGCAGGAATTCCGGCTCTGTCTGGAACTGGTGCATGTAGGCTTTTTGCTGAATTGCAAAGGCAATTCTATCCTGATTCTCAAATGTATCTACCAGATCCTACCTGGTCAAATCACCATAACATATGGAGACAAGCTGAAATTCCAGTCAAAACCTTCCATTACTACCATCCAGATACAAAGAGTTTAGATTTTGCTGCACTCATAAATGATATCAAGAAAGCACCAGATTGTTCTTTCGTCTTGCTTCATCCATGTGCCCACAACCCAACTGGTGTTGACCCCACTGAGGAACAATGGAGAGAAATATCATACCATCTCAAGGTAAAAAATCATTTCCCCTTCTTTGACATGGCTTATCAAGGTTTTTCAAGTGGGGATCTTGACAAGGATGCCATAGCACTTCGAATTTTCCTTGAAGATGGGCACTTGATAGGTTGTGCTCAATCATTTGCAAAGAATATGGGATTATTTGAGCATAAAGTCGGTTGCCTTAGTGTTTTGTGCCAGAATATAAAGCAAGTAGCTGCAATGAAAAGCCAACTGCAGCAGATTTCCCATGCAATGTATAGCAGCATTCCTTTTCATGGTATTTTACTTGCAACTATGATATTAAACAACCCAGATATGCAAGAACTTTGGAGGAAAGAGATAAAGGTCATGGCTAAACGAATTCAAGCAATGCGAACTACACTGCGGTGTTCTCTTGAGGACTTGGATTCATCTTCTAATTGGGAGCATATCACTGCGCAGGTTGGCATGTTCTGTTTCTCTGGATTAACCCCTGAGCAGATTGAACTCCTGGAGAAAGTGTTCCATATATACATGACCCCTGATGGAAGAATAAGCATGGCAGGTGTGACAACAAGCAATGTGAATTATTTAGCAAATGCAATACATCAAGTGACCAGAATCAATGAAGAAGCATTAAGCTCATGTTACAATTAG 1293 0.4122 MWRNINGRFATRFLSTSSSTRGWWDHVRTAPKDPIVSVNKAFLDDPFPHKINLGMGTYRDDDGKPFIPQCVRDAEAKIQRCKFEESSTSAVSSKFVQECVKLAYGNDSYVVRKGLFAGIPALSGTGACRLFAELQRQFYPDSQMYLPDPTWSNHHNIWRQAEIPVKTFHYYHPDTKSLDFAALINDIKKAPDCSFVLLHPCAHNPTGVDPTEEQWREISYHLKVKNHFPFFDMAYQGFSSGDLDKDAIALRIFLEDGHLIGCAQSFAKNMGLFEHKVGCLSVLCQNIKQVAAMKSQLQQISHAMYSSIPFHGILLATMILNNPDMQELWRKEIKVMAKRIQAMRTTLRCSLEDLDSSSNWEHITAQVGMFCFSGLTPEQIELLEKVFHIYMTPDGRISMAGVTTSNVNYLANAIHQVTRINEEALSSCYN* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0838 430 Gene3D Aspartate Aminotransferase, domain 1 27 414 IPR015422 GO:0003824
Apr10g0838 430 CDD AAT_like 127 416 - -
Apr10g0838 430 PRINTS Aspartate aminotransferase signature 196 215 IPR000796 GO:0006520|GO:0008483
Apr10g0838 430 PRINTS Aspartate aminotransferase signature 227 239 IPR000796 GO:0006520|GO:0008483
Apr10g0838 430 PRINTS Aspartate aminotransferase signature 295 320 IPR000796 GO:0006520|GO:0008483
Apr10g0838 430 PRINTS Aspartate aminotransferase signature 363 381 IPR000796 GO:0006520|GO:0008483
Apr10g0838 430 Pfam Aminotransferase class I and II 49 414 IPR004839 GO:0009058|GO:0030170
Apr10g0838 430 Gene3D - 81 322 IPR015421 GO:0003824
Apr10g0838 430 PANTHER ASPARTATE AMINOTRANSFERASE 12 422 IPR000796 GO:0006520|GO:0008483
Apr10g0838 430 SUPERFAMILY PLP-dependent transferases 23 419 IPR015424 -
Apr10g0838 430 PANTHER ASPARTATE AMINOTRANSFERASE 12 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0838 Apr-Chr10 20627985 20631426 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0838 K14455 - gmx:100814593 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0838 10 20627985 20631426 Apr10g0838 10 20627985 20631426 ECH